Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01289 ATGGACTCAAACAAAGACAATCATATGAATGATGGAACAGAATCACAGTTTGGAGGATCTTTCATTTGCCATACTGCTAATCGAATCAACTCTAGAGGATATTGGTTAGGCGAAAATCCCCTCGCTTTTTCTGTCCCTCTTTTCTTGATCCAGGTTTTTATCATATTCATCTTCACAAGATTCAGTCACCTTATCCTCAAGCCCTTTGGTCAACCTTCTTTTGTTTCTCAGATTCTTGGTGGTGTAACACTAGGCCCTTCAGTTCTTGGTCACTACTCAGCATTTACAAACAATTTTTTCCCGGTAAGAGGAAGAAACGTGCTGGACACGTTAGCGTTTTTCGGTTTCATGATATTCATCTTCCTGCTTGGGGTAAAGATAGATCCAACCATCATTTTTCGATCAGGTAAAAGGACGTTCGCTATCGGGATTTTATGCTTCTTTGTTCCCTACACTCTCAGCGGATTAGTAGCTTTGTTTATCAACCATTTTGCATCATTGGATCATGCTATTTCCAAAGGCCTTCCTACTGTGGTGGAAATTCAATGTATCACAGCCTTTCCTGTCATTTCTTGCTTTCTCACTGAACTTCATATCCTCAATTCAGAGATTGGACGCCTGGCTTCATCGTCTTCGCTAGTATGTGATTTTTGTTTCGGTTTAGTTATGATGTTGAAGTTTGCTGCGAAACTAACTTCTGCAAAATCGATAGGAGTAACCATTGGATCGCTCTTTTCGTCCGCTCTTCTTGTTTCTTTCATAGTTTTTGTTGTTCATCCAGCTGCATTGTATGCTATTAATCACACACCAGAAGGGAAACCTGTTCAAGAGATTTATATAATTGGAACTCTGATAACACTAATATTCTGTGGACTCATCGGTGAAGTTATTGGCTTTGACGCAATTGTTGTATCTTTTATGGTAGGGTTAGCTATACCAGATGGTCCTCCATTAGGTGCAGCATTGGTAGATAAGATTGAGTGTTTTGTTTCGGTCGTGCTTTTACCGTTGCTTTTTGCTGTCGTTGGAATGAGGACAGATGTTTTTGCTATACAGAAGATGAAGACTTTGGGGATAGTTGAGTTGATTATTTGCATTGCGTTTTTCGGTAAATTGTTAGGGGCTTTATTGCCTCTACTTTTCTATAGGATGCCATTTAGAGATGCAATTTCTCTTAGTCTTATAATGAATTGCAAAGGCACTGTTGAATTGGCATTGTTGATGAACATGAAATTGAAAAATGTTTTGGATGATGAACTGTTTTCAATTCTGGTTCTTACTTTAGTGCTTGTAACCGGCATTGTTTCTCCGGTTGTGAAAGCTCTATATGATCCTTCTAGAAGATTTCTTGCTTACAAAAGGAGAACAATCTTGCATCACCCAAGCGAAGAAGAATTTAGAATACTAGCTTGCATTCATAAAGAAGATAATGTATTGGCAGTTTTGAACCTACTTGCTGCTTCGAATCCAACCGAAAAAGCCCGCATCGATTTAGTTGTACTACAGCTTGTTAAGCTTGTTGGAAGAGCTGCATCCGTGCTTGTTTCACATAAGCCGCGCGATAAGCCTGGCGAAAAAATCTTCATTCCATTCACCAAATTTGAAGATGGTTATAGGGGAAAGGTAACACTACATTGCTATAAAGGTATATCACCATATGCAACAATGCACAATGATGTGTGCTACTTAGCACTTGAGAAAAGAATAACTTTCATAATCATACCGTTTCATAAACAATGGATAATCGGAGGAATGGCCGAGTCATCTTTCGCATTCAAGCAACTCAACAAGAATGTTCTCGAGAAAGCTCCTTGCTCGGTCGGTGTCCTAATTGACCGTGGCAACCAGAAGAAGTTCTGGTGCGGCTACATGAACGAATCAACATATCTAGTTGCAGTGCTTTTCTTTGGAGGCGCAGACGATAGAGAAGCGCTCGCGTACGCGAAGCGAATGTTGGATCAACCTAATGTAAATATTACTCTCTTTCATTTTTCTTCGGCCAAAAATGATGTTGTGGGCGGTACAGATAGAAGCAAAAAGCTTGACACTCAAATATTGAGTGAATTTAGGCTAAGTGGTTTTAGGAATGATAGAGTTTTTTATAAAGAAGAAGATGTTGTGAACGGAAGAGACGTGCTTTCTGTTATCGAATACATGGAGAGTTATTATGACCTTGTTATGGTAGGAAGGAGACATGAAGATTCACAGTTGATGTCTGAACTTAAGAAATGGAAGCATGGTGAGTTGGGAACTGTTGGAGAGATTCTTGCTTCATTGAACATTGGTGCTAAAACATCAGTTTTGGTTGTGCAACAACAAACTAAATTTTGGGGGTCACGTGATCCAGAGGAGTCAACACATTTGAGAAGAGTAAATATATAG 2382 0.3942 MDSNKDNHMNDGTESQFGGSFICHTANRINSRGYWLGENPLAFSVPLFLIQVFIIFIFTRFSHLILKPFGQPSFVSQILGGVTLGPSVLGHYSAFTNNFFPVRGRNVLDTLAFFGFMIFIFLLGVKIDPTIIFRSGKRTFAIGILCFFVPYTLSGLVALFINHFASLDHAISKGLPTVVEIQCITAFPVISCFLTELHILNSEIGRLASSSSLVCDFCFGLVMMLKFAAKLTSAKSIGVTIGSLFSSALLVSFIVFVVHPAALYAINHTPEGKPVQEIYIIGTLITLIFCGLIGEVIGFDAIVVSFMVGLAIPDGPPLGAALVDKIECFVSVVLLPLLFAVVGMRTDVFAIQKMKTLGIVELIICIAFFGKLLGALLPLLFYRMPFRDAISLSLIMNCKGTVELALLMNMKLKNVLDDELFSILVLTLVLVTGIVSPVVKALYDPSRRFLAYKRRTILHHPSEEEFRILACIHKEDNVLAVLNLLAASNPTEKARIDLVVLQLVKLVGRAASVLVSHKPRDKPGEKIFIPFTKFEDGYRGKVTLHCYKGISPYATMHNDVCYLALEKRITFIIIPFHKQWIIGGMAESSFAFKQLNKNVLEKAPCSVGVLIDRGNQKKFWCGYMNESTYLVAVLFFGGADDREALAYAKRMLDQPNVNITLFHFSSAKNDVVGGTDRSKKLDTQILSEFRLSGFRNDRVFYKEEDVVNGRDVLSVIEYMESYYDLVMVGRRHEDSQLMSELKKWKHGELGTVGEILASLNIGAKTSVLVVQQQTKFWGSRDPEESTHLRRVNI 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01289 793 Pfam Sodium/hydrogen exchanger family 54 439 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa2g01289 793 Gene3D - 47 449 IPR038770 -
Vifa2g01289 793 PANTHER CATION/H + ANTIPORTER 22 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01289 Vifa-Chr2 349415720 349418439 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01289 9 793 Antiporter Super Family AT2G13620 37.729 2.99e-175 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01289 K26731 - gmx:102665255 1117.06