Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01284 ATGGCTTATTCTACTAGTCTTCAATGGCTTAGCCTAGTTGGCATCATTTGGCTCCAAGTCATAAATGGAACAAACACAAACTTCCCAGCTTATTCTTCCCAGCTAAAACAGCTTCTCTCCATTTCACAAGTTGAACTCAATAACCTTGCTTTTGCATCTGATGCTGGCAAACTTTTTGGTTGGTTTTCTGGCCTTGCTGCTATTTACCTCCCTCTCTGGCTCGTCCTCATCGTCGGTTCGTTCCTAGGACTAATCGGTTATGGTGTACAATATCTCTTCATAACCAACCATATATCTTATCTATCATATTGGCATGTCTTCTTCCTAACATTTCTTGCTGGCAATAGCATTTGTTGGATCAACACTGTTTGTTATGTTGTTGCCATAAGAAACTTTTTATCCGATCGTCAAGTCGCGGTCGGGTTAACAACTAGTTATCAAGGATTAAGTGCAAAGATTTATACAAATATTGCTGATGTTGTTTCTTCACACAATAATAAAGCTAAAACTTTTCTATTCTTGAACTCTATAATACCTGTGGCCGTTTGCTTAACATTAGCACCTATAGTAAGAGAAATAGAAGTGAAAAATGCAAAGCATTCTAGTGTTGTTTTTGCTTTGATGTTTGTTATTACAATTGCCACGGGAATATATGCTGTGATTAGCAGCTTGCAAATTTTCACAAACAAAATTTCTACACTTGGTGTTCATATTGGTATTCTAGCATCTCTTCTCTTACCTCTTCTACTCCCAATTTGTGTGAAGATCAAGGAAGTAGTTGAATCACTGAATAAGAAAAGAGAAAAACTAAGAATCTACCATTTTACCATGGAGGAGAATATTAATAAAGAGAGAATAGAGAATGATGTGAAAGAGGGTGAAGTTGAAGATGGTTGTGTTATGGAAGAAATAGGTGTGAAGTTAATGTTGAAAAGAATGAATTTCTGGTTATATTTCTGTGTGTATCTTTTTGGTGCAACAATTGGTTTAGTATTTCTGAACAATTTGGGACAGATAGCTGAATCAAGAGGTTGTTCTGGTACTTCATATTTGGTGTCTTTGTCTTCTTCTTTTGGATTCTTTGGTCGTCTCATTCCATCTCTTCTAGACTACTTCTACAGGGGAAAACATACAATTTCAAGACCTGCCTCTATGGTAGCAGTAATGGCACCAACAGCAGGTGCATTCTTCTTACTTCTCAACAAAACTGACATTGCTCTTTACATAAGCACAGCTGTGATTGGAGTCTCAACTGGAGCAATCACTTCCACTGCTATTTCCACAACAACTGAACTATTTGGAACAAAGAATTTCTCTGTAAACCATAATGTGGTTGTGACTAATATTCCAATAGGATCTTTTTTATTTGGTTACTCAGCTGCACTTGTCTACCGTAAGCAAGGAAATGGACATGGGAAATGCATGGGCATGGAATGTTTTAGTAACACTTTTATCATTTGGGGTTCATTTTCTTGCCTTGGAACTTTATTGGCTTTGATTCTAAATTTTAGGACTCGCAAGTTTTACTCACAAAGTCAATAG 1542 0.3684 MAYSTSLQWLSLVGIIWLQVINGTNTNFPAYSSQLKQLLSISQVELNNLAFASDAGKLFGWFSGLAAIYLPLWLVLIVGSFLGLIGYGVQYLFITNHISYLSYWHVFFLTFLAGNSICWINTVCYVVAIRNFLSDRQVAVGLTTSYQGLSAKIYTNIADVVSSHNNKAKTFLFLNSIIPVAVCLTLAPIVREIEVKNAKHSSVVFALMFVITIATGIYAVISSLQIFTNKISTLGVHIGILASLLLPLLLPICVKIKEVVESLNKKREKLRIYHFTMEENINKERIENDVKEGEVEDGCVMEEIGVKLMLKRMNFWLYFCVYLFGATIGLVFLNNLGQIAESRGCSGTSYLVSLSSSFGFFGRLIPSLLDYFYRGKHTISRPASMVAVMAPTAGAFFLLLNKTDIALYISTAVIGVSTGAITSTAISTTTELFGTKNFSVNHNVVVTNIPIGSFLFGYSAALVYRKQGNGHGKCMGMECFSNTFIIWGSFSCLGTLLALILNFRTRKFYSQSQ 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01284 513 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 510 - -
Vifa2g01284 513 Pfam Nodulin-like 8 255 IPR010658 -
Vifa2g01284 513 SUPERFAMILY MFS general substrate transporter 6 507 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01284 Vifa-Chr2 348388612 348390601 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01284 7 511 Nodulin-like Gene Family AT2G30300 49.423 4.52e-150 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01284 - - gmx:100793370 732.25