Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01281 ATGCCTTATTCTACTAGTCTTCAATGGCTTAGCCTAGTTGGCATCATTTGGCTCCAAGTCATAAATGGAACAAACACAAACTTCCCAGCTTATTCTTCCCAGCTAAAACAGCTTCTCTCCATTTCACAAGTTGAACTCAATAACCTTGCTTTTGCATCTGATGCTGGCAAACTTTTTGGTTGGTTTTCTGGCCTTGCTGCTATTTACCTCCCTCTCTGGCTCGTCCTCATCGTCGGTTCGTTCCTAGGACTAATCGGTTATGGTGTACAATATCTCTTCATAACCAACCATATATCTTATCTATCATATTGGCATGTCTTCTTCCTAACGTTTCTTGCTGGCAATAGCATTTGTTGGATCAACACTGTTTGTTATGTTGTTGCCATAAGAAACTTTTTATCCGATCGTCAAGTCGCGGTCGGGTTAACAACTAGTTATCAAGGATTAAGTGCAAAGATTTATACAAATATTGCTGATGTTGTTTCTTCACACAATAATAAAGCTAAAACTTTTCTATTCTTGAACTCTATAGTACCTGTGGCTGTTTGCTTAACATTAGCACCTATAGTAAGAGAAATAGAAGTGAAAAATTCAAAGCATTCTAGTGTTGTTTTTGCTTTGATGTTTGTTATTACAATTGCCACTGGAATATATGCTGTGATCAGCAGCTTGCAAATTTTCACAAACAAAATTTCTTCACTTGGTGTTCTTATTGGTATTCTAGTATCTCTTCTCTTACCTCTTTTACTCCCAGTTTGTGTGAAGATCAAGGAGATAGTTGAATCATTGCACAAAAAAAGAGAAAGACTAAGAATCTACCATTTTACGATTGAGGAGAATATTAATAAAGAGAGAATAGAGAATGATGTGAAAGAGGGTGAAGTTGAAGATGGTTGTGTTATGGAAGAAATAGGTGTGAAGTTAATGTTGAAAAGAATGAATTTCTGGTTATATTTCTTTGTGTATTTTTTTGGTGCAACAATTGGTTTAGTATTTCTGAACAATTTGGGACAGATAGCTGAATCAAGAGGTTGCTCTGGTACTTCATATTTGGTGTCCTTGTCTTCTTCTTTTGGATTCTTTGGTCGTCTCATTCCATCTCTTCTAGACTACTTTTACAGGGGTAAACGTACAATTTCAAGACCTGCCTCGATGGTGGCAGTAATGGCACCAACAGCATGTGCATTCTTCTTACTTCTCAACAAAACTGACATTGCTCTTTACATAAGCACGGCTGTGATTGGAGTCTCAACTGGAACAATCAGTTCTACTGCTATTTCCACAACAACTGAACTATTTGGAACAAAGAATTTCTCTGTAAACCATAATGTGGTTGTGGCTAATATTCCAATAGGATCTTTTTTATTTGGTTACTCAGCTGCACTTGTCTACCGTAAGCAAGGAAATGGACATGGGAAATGCATGGGCATGGAATGTTTTAGTGACACTTTTATCATTTGGGGTTCTTTTTCTTGCCTTGGAACTTTATTGGCTTTGATTCTATACTTTAGGACTCGTAAGTTTTACTCACAAAACCAATAG 1542 0.369 MPYSTSLQWLSLVGIIWLQVINGTNTNFPAYSSQLKQLLSISQVELNNLAFASDAGKLFGWFSGLAAIYLPLWLVLIVGSFLGLIGYGVQYLFITNHISYLSYWHVFFLTFLAGNSICWINTVCYVVAIRNFLSDRQVAVGLTTSYQGLSAKIYTNIADVVSSHNNKAKTFLFLNSIVPVAVCLTLAPIVREIEVKNSKHSSVVFALMFVITIATGIYAVISSLQIFTNKISSLGVLIGILVSLLLPLLLPVCVKIKEIVESLHKKRERLRIYHFTIEENINKERIENDVKEGEVEDGCVMEEIGVKLMLKRMNFWLYFFVYFFGATIGLVFLNNLGQIAESRGCSGTSYLVSLSSSFGFFGRLIPSLLDYFYRGKRTISRPASMVAVMAPTACAFFLLLNKTDIALYISTAVIGVSTGTISSTAISTTTELFGTKNFSVNHNVVVANIPIGSFLFGYSAALVYRKQGNGHGKCMGMECFSDTFIIWGSFSCLGTLLALILYFRTRKFYSQNQ 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01281 513 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 510 - -
Vifa2g01281 513 SUPERFAMILY MFS general substrate transporter 6 507 IPR036259 -
Vifa2g01281 513 Pfam Nodulin-like 8 255 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01281 Vifa-Chr2 347223390 347225668 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01281 7 512 Nodulin-like Gene Family AT2G30300 49.136 1.56e-150 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01281 - - gmx:100800763 703.36