Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01252 ATGTCTTGCTCTATTAGAAAGAGGCCGGCTAAGCTTCATATACCTGTTGCTTCTTTAACTATTGAAGTCCGCCGGCGCGTGATTACTCCGGCGCCGGAAAAGGATGTTGTTGAGGTGGAGGGAAATGGGTTTCTGTGTATTGTAAGAGAGGAAGTAGGAAACATATGGAGGATCGTTATTCGGCTTCTGATGATCTTCATGAAGAAACAAAACATGCTTTTTTTGGCATATTTGATGGGCATGGAAGTTCAAAAGCTTCGGAATTCGCAGCAGATAACATGGAGAAGAATGTCATTGATTAAGAACAGTAATCTTATCGTGTCTAATGCGGGCGATTGTCGCGCAGTTATCAGCGAGGAGGTGTTGCTTGAGGCCTTAACATCTGATCACAAACCTTCGAGAGAAGACGAAAAAGACAGGATCGAATCTCAGGGTGGCTATGTTGATATGTGCCGGGGCGTGTGGAGAATCCAAGGATCTCTTGCTGTTTCCAGGAGCATTGGAAATAGACACATGAAACAATGGGTTATAGCAGAACCTGAGACCAAAGTTCTCAGAATTGAACCTCACCATGACTTGTTAATCCTAGCTTCAGATGGATTATGGGACAAGGTTAGTAATCAGGAAGCAGTAGATATGGCTCGTCCTTTCTGTGCAGGGAACAATAAACAAGGACCCCTTCAAGCTTGTAAGAAACTTGTCGAATTATCAGCGTCACGAGGCTCTATCGATGATACAAGTGTTATGATCATCAAATTACAGAAATATATTTGA 774 0.4302 MSCSIRKRPAKLHIPVASLTIEVRRRVITPAPEKDVVEVEGNGFLCIVREEVGNIWRIVIRLLMIFMKKQNMLFLAYLMGMEVQKLRNSQQITWRRMSLIKNSNLIVSNAGDCRAVISEEVLLEALTSDHKPSREDEKDRIESQGGYVDMCRGVWRIQGSLAVSRSIGNRHMKQWVIAEPETKVLRIEPHHDLLILASDGLWDKVSNQEAVDMARPFCAGNNKQGPLQACKKLVELSASRGSIDDTSVMIIKLQKYI 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01252 257 Gene3D - 68 257 IPR036457 -
Vifa2g01252 257 SUPERFAMILY PP2C-like 98 254 IPR036457 -
Vifa2g01252 257 PANTHER PROTEIN PHOSPHATASE 100 252 IPR015655 GO:0004722|GO:0006470
Vifa2g01252 257 CDD PP2Cc 97 253 IPR001932 -
Vifa2g01252 257 ProSiteProfiles PPM-type phosphatase domain profile. 1 253 IPR001932 -
Vifa2g01252 257 Pfam Protein phosphatase 2C 97 245 IPR001932 -
Vifa2g01252 257 SMART PP2C_4 15 251 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01252 Vifa-Chr2 339661432 339662596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01252 6 253 PP2C-type Phosphatase Gene Family AT1G07160 47.099 7.65e-77 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01252 K17506 - gmx:100818903 273.478