Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01234 ATGAAACTCTCAACTCCAACTACATCTTGTTCAAATGTATCTCCATCAACTTCTTCCAACACACCAATGTGTAGCTCCAAAAGCACCACTACAGGCTGTTTCACAGCCATCATGCACAAGATTCTCTGTTCTGGAAATCTTCCAAAAGATTCATCGAATCAAGTTACCGAATTTGATTCAACAAACTCCGTTCTGAGTGGAAAAGATCAAAACTTTAATGCTGCTGTTACTCCTCCTCCTCCATTAGTTGCAAGGCTAATGGGTTTGGAATCAATGGGAGAGATAGAGATACCTTTTGCGTCCAAACCGGGATCACTTTCGCGTAGCAAATCGATGAACTCTATGGACTATTTGGGAGAAAGCAATGGAAAAGTTCAGAGTCTGAATCATAAGAGAGTTAGTTCAACATTGTCATTTAGGGAAGCCCCGACTTTTCGATTAAGTGAAAATGATAACTTTTTTGTGCTTAGCTTTGAAAATGAAGTTGAGAATTGTAAAGCATTGAAATCCAATGGGAGAAAAAAGCAAACGGGTTGTTCGGAATCGAAGCAGAAAGTGGCAGCAACAGATAGAACTGAACTGAAGGAAAATGTTTATGATGAGAACGATTTGATTGAGAAAGAGAAAACGAGCAAAAGGGTGTCGAATAAACTTCAAGAAATCACCAACACTTTGCATCGGTTCAAGGATTCGTCTGAGAACAAGTGTTTTGATTCAGAAGCAGGTGAGTTGTGGAAGTCGAGGAACTATAACGAATCTGTGGTTGGTGAAAAGATGAAGAAGAGGAAGAGGATTAGGAAGAAGAAAACAAATTGTTATGCAGAAAAGAAGGTAGAAACTGAATGTGTTAAATCAGAAGATTCAAGTCCTGTTTCTGTTCTTGAATTCGACCGCAAATCTTGTGCAGCAGGCATAGATTCTGTTGCAGTTGGTTCGATTTCAAGAAGAAAGTTGACACCAGAGCTTGAAAAGGGAAAGCATATTCTTATGCGATGTGATGATAATTTGATGGTTGATGAGAACAAGGATAAGGAAATTGAGAAGAACAAATGTGAAGAAACAAAGAAGAAAGAGAAGAAGATGAAAGAGTATATAGGGATTTGGGGTGAAGCAAGCAAGCTAGTTGAAGATGAATTGGCAGGTTCAAAGAAGCAATTAGTTGATGCATGGATTAAAGAACAATGTGCTGATTTTGAGTCAGAAATTTTTAATCAATTGTTGAATGAAGTGGTAAGTGAACTTGTTGGGTAA 1251 0.3821 MKLSTPTTSCSNVSPSTSSNTPMCSSKSTTTGCFTAIMHKILCSGNLPKDSSNQVTEFDSTNSVLSGKDQNFNAAVTPPPPLVARLMGLESMGEIEIPFASKPGSLSRSKSMNSMDYLGESNGKVQSLNHKRVSSTLSFREAPTFRLSENDNFFVLSFENEVENCKALKSNGRKKQTGCSESKQKVAATDRTELKENVYDENDLIEKEKTSKRVSNKLQEITNTLHRFKDSSENKCFDSEAGELWKSRNYNESVVGEKMKKRKRIRKKKTNCYAEKKVETECVKSEDSSPVSVLEFDRKSCAAGIDSVAVGSISRRKLTPELEKGKHILMRCDDNLMVDENKDKEIEKNKCEETKKKEKKMKEYIGIWGEASKLVEDELAGSKKQLVDAWIKEQCADFESEIFNQLLNEVVSELVG 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01234 416 Pfam DUF761-associated sequence motif 79 92 IPR032795 -
Vifa2g01234 416 MobiDBLite consensus disorder prediction 1 26 - -
Vifa2g01234 416 Coils Coil 341 361 - -
Vifa2g01234 416 PANTHER OS05G0128300 PROTEIN 19 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01234 Vifa-Chr2 336052395 336053833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01234 26 414 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 29.877 1.21e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01234 - - mtr:25490904 486.878