Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01221 ATGGAGGTTTCATGGGAACAAGGATCTGTCCGGGCCAAAAATGCTATGAACATAATGCTTACCAATGTAGTTGATGCAGTGGTAGGTAGCATATCTTTCTATCTTTTTGGTTTTGCATTTGCCTATGGAAATTCCAACCCTTTCATTGGTACAAACTTGTTTGCTTTAGCTAACATTCCAAATGAAAATTATGACTATGGATTCTTTCTATACCAATGGGCTTTTGCTATAGCTGTAGCAGGTATAACTAGTGGATCTATAGCTGAGAGAACACAATTCAGTGCTTATCTTGTTTTTTCATTTTTTCTTACTGGCTTTGTGTACCCAATTGTGGCCCATTGGGTTTGGTCATCTAGTGGTTGGCTTAGTCCAAACTCAAGTGACTTGTTCTTGGGCACAGGTGCCATTGACTTTGCTGGGAGTGGAGTGGTGCATTTGGTTGGTGCCATTGCTGGACTTTGGGGATCTATTATAGAAGGTCCACGGGCCGGGCGGTTTGACGCTTATGGAAAGGCAGTACCTTTCCGTGGCCACAATGCCGCACTTGTGGTTCTCGGGACGTTCTTGTTGTGGTTCGGTTGGTTCGGGTTTAATCCTGGCTCGTTCGACAAAATTCTCGTGGCCTACCCTGGCACAATCGATGAAGGCAATTGGACATCGATAGGTCGAACCGCCGTGACAACTACATTGGCAGGCTCGACTGCAGGAATCGTCACTTTGTTCAGCCGTCGATTATTGATTGGCCACTGGGATGCAATGGATGTATGCAACGGTTTGATTGGGGGGTTTGTTGCCATCACATCCGGGTGCTCAGTTGTCGAGCCATGGGCCGCTATTCTATGTGGATTCGTCTCGGCTTGGGTGTTAATCGGGCTCAACATCTTAGCACTAAAACTAAACTATGATGATCCATTAGAGGCAGCTCAATTACATGGTGGATGTGGCACTTGGGGATTGTTGTTTACAGGGCTATTTGCCAAAGAGGAGTTTGTGGTTCAAACATATAATGCAGGTGTTGCAGTGAAAAGACCCTATGGTCTTCTACTTGGAGGTGGATGGGGTTTGATTGGAGCTCAAGTGGTTGAGATTTTGGTTATCTTTGGATTTGTTAGTATAACAATGGGACCTATGTTCTATGCCTTGCACAAACTTAAGCTACTTAGAATTCCTGTGGCTGATGAACTTGCTGGCCTTGATATATCAAGCCATGGAGGCTATGCTTATGCTCATCATGAAGAAAGTAATCCTCGTTCTTATGGAGATTATATGCGTATGCAACAAGATAATCAATCATAG 1296 0.4444 MEVSWEQGSVRAKNAMNIMLTNVVDAVVGSISFYLFGFAFAYGNSNPFIGTNLFALANIPNENYDYGFFLYQWAFAIAVAGITSGSIAERTQFSAYLVFSFFLTGFVYPIVAHWVWSSSGWLSPNSSDLFLGTGAIDFAGSGVVHLVGAIAGLWGSIIEGPRAGRFDAYGKAVPFRGHNAALVVLGTFLLWFGWFGFNPGSFDKILVAYPGTIDEGNWTSIGRTAVTTTLAGSTAGIVTLFSRRLLIGHWDAMDVCNGLIGGFVAITSGCSVVEPWAAILCGFVSAWVLIGLNILALKLNYDDPLEAAQLHGGCGTWGLLFTGLFAKEEFVVQTYNAGVAVKRPYGLLLGGGWGLIGAQVVEILVIFGFVSITMGPMFYALHKLKLLRIPVADELAGLDISSHGGYAYAHHEESNPRSYGDYMRMQQDNQS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01221 431 ProSitePatterns Ammonium transporters signature. 137 162 IPR018047 GO:0008519|GO:0016020|GO:0072488
Vifa2g01221 431 FunFam Ammonium transporter 3 422 - -
Vifa2g01221 431 Pfam Ammonium Transporter Family 6 408 IPR024041 GO:0008519|GO:0016020|GO:0072488
Vifa2g01221 431 SUPERFAMILY Ammonium transporter 6 389 - -
Vifa2g01221 431 Gene3D Ammonium transporter AmtB like domains 3 424 IPR029020 -
Vifa2g01221 431 PANTHER AMMONIUM TRANSPORTER 6 410 - -
Vifa2g01221 431 NCBIfam ammonium transporter 6 408 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01221 Vifa-Chr2 331726883 331728268 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01221 8 415 Inorganic Solute Cotransporters AT1G64780 66.265 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01221 K03320 - pvy:116129597 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01221 2 331726883 331728268 Vifa2g01221 2 331726883 331728268 ECH