Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01202 ATGATATCTTTTGTTAAGAACATGATGATGGAAATGGATACAAACACATTTACACTCTTGTTCACTCTAGCAGCTTCCCTCTTTGCATACTTATTCTGGTTCCACTTACTAGCACGAAACTTAACCGGTCCTAAAGTTTTCCCATTTCTCGGCAGCCTCCCGGTTCTCTTCCTAAACCGAAACCGGGTTCACGACTGGATAACCTCAAACCTAAACCAAACCGGGGGTTCATCCACTTATCAAACATGCATCCTGCCTTTCCCTTTCTTGGCAAGCAAACAAGGCTTCTACACAGTCACAAGCAACCCAAAAAACATCGAACACATCCTCCGAACCCGGTTCGATAATTACCCAAAAGGACCCACATGGCAAACCGCTTTCCACGATCTTTTAGGACACGGAATCTTCAACAGCGACGGCGACACGTGGCTGGTTCAACGCAAAACCGCTGCTTTAGAATTCACCACAAGAACCCTTCGTCAAGCCATGGCTCGTTGGGTGAACCGAACCATTAAAAACCGATTATGGTGTATTTTAGACAAAGCCGCTAAAGAAAAAGTTAGTGTTGATTTGCAAGACCTTCTTTTACGGTTAACTTTTGATAACATTTGTGGACTCACTTTCGGTAAAGATCCGGAAACTCTCTCACCGGAACTACCCGATAACCCGTTTTCTCTTTCATTTGATTCGGCAACTGAAGCTACATTGCAAAGACTACTTTACCCCGGACTCTTCTGGAGGTTCCAGAAGCTTTTATCTATTGGCGCTGAGAAAAAACTGAAACAGAGTTTGAAAATTGTTGAAACTTACATGAACGACGCCGTTTCAGCTCGTGAGAAATCTCCTTCCGATGATCTTCTCTCACGGTTTCTTAAAAAGCGCGACGGCGATGGAAAACCGTTTGACGCCGGGAAACTGAGACATATAGCGTTGAATTTTGTTCTCGCCGGGAGAGATACTTCATCGGTTGCTTTGAGCTGGTTTTTCTGGCTTGTCATGAATCATCCAAACGTGGAGGAGAGGATTGTATCTGAGTTGATAGATGTTTTGGCTGAAACTCGAGGTAGAGATCGTCGTCGTTGGACTGATGAGGCGGTGGATTTTGAAGAAGCTGATAAGCTTGTTTATCTGAAAGCAGCGTTGGCCGAGACGCTGAGGCTGTATCCTTCTGTGCCGGAGGATTCTAAATATGCGGTGGAGGACGATGTTTTACCGGACGGAAGTTTGGTTCCGGCGGGATCGACGGTGACGTATTCGATATATTCCGTAGGGAGGATGAAGAGTGTGTGGGGTGAAGATTGCATGGAGTTTAAACCGGAGAGGTGGTTATCGGTTCAGGGAAACCGGTTCGAACCGCCGAAAGATGGGTATAAGTTTGTGGCTTTTAATGCTGGACCGAGGACTTGTTTGGGGAAGGATTTGGCTTATCTTCAGATGAAATCTGTTGCTGCTGCTGTGTTGATTCGTTACCGGCTTTTACCGGTTCCCGGTCATCGGGTTCAGCAGAAGATGTCTCTTACGCTTTTCATGAAGTATGGGTTACGTGTGTTCTTGGTTCCACGTCAGCTTCAGGAGCCCGAATCTGTTGTGGCTCATTGA 1599 0.4603 MISFVKNMMMEMDTNTFTLLFTLAASLFAYLFWFHLLARNLTGPKVFPFLGSLPVLFLNRNRVHDWITSNLNQTGGSSTYQTCILPFPFLASKQGFYTVTSNPKNIEHILRTRFDNYPKGPTWQTAFHDLLGHGIFNSDGDTWLVQRKTAALEFTTRTLRQAMARWVNRTIKNRLWCILDKAAKEKVSVDLQDLLLRLTFDNICGLTFGKDPETLSPELPDNPFSLSFDSATEATLQRLLYPGLFWRFQKLLSIGAEKKLKQSLKIVETYMNDAVSAREKSPSDDLLSRFLKKRDGDGKPFDAGKLRHIALNFVLAGRDTSSVALSWFFWLVMNHPNVEERIVSELIDVLAETRGRDRRRWTDEAVDFEEADKLVYLKAALAETLRLYPSVPEDSKYAVEDDVLPDGSLVPAGSTVTYSIYSVGRMKSVWGEDCMEFKPERWLSVQGNRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLIRYRLLPVPGHRVQQKMSLTLFMKYGLRVFLVPRQLQEPESVVAH 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01202 532 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01202 532 PRINTS E-class P450 group I signature 39 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01202 532 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01202 532 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01202 532 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01202 532 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01202 532 CDD CYP86A 81 514 - -
Vifa2g01202 532 Pfam Cytochrome P450 98 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01202 532 PANTHER CYTOCHROME P450 33 515 - -
Vifa2g01202 532 Gene3D Cytochrome P450 37 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01202 532 FunFam Cytochrome P450 35 524 - -
Vifa2g01202 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Vifa2g01202 532 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01202 532 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01202 532 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01202 532 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01202 532 SUPERFAMILY Cytochrome P450 33 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01202 Vifa-Chr2 324886332 324887930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01202 24 521 Cytochrome P450 AT5G58860 74.498 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01202 K15401 - gmx:100787559 863.603