Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g01190 | ATGAAGTGTGAAATGGGAATTCTTTCTCATGCACCATTTGTTGAAAACAATTGGTTTATGGAAGATAGAAGTAACATTAACAGGAGAGCAACAAAATGGACTGCATCAGAGAACAAGTTGTTTGAAAATGCTCTTGCTGTTTATGATAAAGATACGCCGGATCGGTGGGCTAAGGTAGCTGAAATGATACCTGGAAAATCTGTTGTTGATGTGATGAATCAGTATAAGGAATTGGAAGTTGATGTTTGTAATATTGAAGCTGGTTTAGTTCCAATTCCTGGTTATAGTACTATTACTAGTACTACTACTGCCTCACCTTTTACCTTGGATTGGGTTAGTTCTTCTGGTTATGATGCTTTTAGAGGAATCAATTCTAAGAGAAGTGGTTCCGGTAGATCGATCGATCAGGAGAGGAAGAAAGGCGTGCCATGGACCGAAGAAGAACACAAGTTATTTCTATTGGGTCTGAAAAAGTATGGAAAAGGTGATTGGAGAAACATATCAAGAAACTTTGTGATCACAAGAACACCAACACAAGTTGCTAGCCATGCTCAAAAATATTTCATCCGACAACTTTCCGGCGGCAAAGACAAAAGAAGAGCTAGCATCCATGACATAACAACGGTTAACCTCACCGAAACTTCAAAAGCTTCTCCAACTTCAGAAAACACCAAAACATCCACTTCACCAAACCATAACCATTCCATGAACATCATCAACAAATATTCCACCGCCGCATCCGAGATGCATTTTCAGCCGACTATGATGATGACGGCTTTCGACCCCTCACATGAACAAGTTTTCATGTCTCATAATAACTCTTATGGATTTAAAATGCAAGGTCAAAATCAAAATATGCATAGAAATACTCTTCATGAGTCTTCTTACTTTGGAACTCAAACACAAAACATGGTCTTCCAAATGCAATCTTCTCAACAAAACTATTCACATGCATGA | 957 | 0.3845 | MKCEMGILSHAPFVENNWFMEDRSNINRRATKWTASENKLFENALAVYDKDTPDRWAKVAEMIPGKSVVDVMNQYKELEVDVCNIEAGLVPIPGYSTITSTTTASPFTLDWVSSSGYDAFRGINSKRSGSGRSIDQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLTETSKASPTSENTKTSTSPNHNHSMNIINKYSTAASEMHFQPTMMMTAFDPSHEQVFMSHNNSYGFKMQGQNQNMHRNTLHESSYFGTQTQNMVFQMQSSQQNYSHA | 318 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g01190 | 318 | MobiDBLite | consensus disorder prediction | 213 | 236 | - | - | |
Vifa2g01190 | 318 | PANTHER | DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED | 28 | 297 | IPR043363 | - | |
Vifa2g01190 | 318 | SUPERFAMILY | Homeodomain-like | 26 | 79 | IPR009057 | - | |
Vifa2g01190 | 318 | SUPERFAMILY | Homeodomain-like | 138 | 191 | IPR009057 | - | |
Vifa2g01190 | 318 | Pfam | Myb-like DNA-binding domain | 143 | 188 | IPR001005 | - | |
Vifa2g01190 | 318 | Pfam | Myb-like DNA-binding domain | 32 | 77 | IPR001005 | - | |
Vifa2g01190 | 318 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 139 | 191 | IPR006447 | GO:0003677 | |
Vifa2g01190 | 318 | ProSiteProfiles | Myb-like domain profile. | 136 | 188 | IPR001005 | - | |
Vifa2g01190 | 318 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 136 | 192 | IPR017930 | - | |
Vifa2g01190 | 318 | Gene3D | - | 142 | 192 | - | - | |
Vifa2g01190 | 318 | ProSiteProfiles | SANT domain profile. | 144 | 192 | IPR017884 | - | |
Vifa2g01190 | 318 | CDD | SANT | 143 | 188 | IPR001005 | - | |
Vifa2g01190 | 318 | Gene3D | - | 25 | 92 | - | - | |
Vifa2g01190 | 318 | CDD | SANT | 32 | 78 | IPR001005 | - | |
Vifa2g01190 | 318 | SMART | sant | 29 | 81 | IPR001005 | - | |
Vifa2g01190 | 318 | SMART | sant | 140 | 190 | IPR001005 | - | |
Vifa2g01190 | 318 | FunFam | Transcription factor SRM1 | 25 | 92 | - | - | |
Vifa2g01190 | 318 | FunFam | transcription factor MYB1R1 | 142 | 193 | - | - | |
Vifa2g01190 | 318 | ProSiteProfiles | Myb-like domain profile. | 25 | 79 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g01190 | Vifa-Chr2 | 321742065 | 321743420 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Vifa2g01190 | Myb_DNA-binding | 1.6e-12 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g01190 | - | - | cam:101514273 | 444.121 |