Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01137 ATGGCGGCAACGCTTAGTTTCGCCTCTCTCTCCGCCGTCCGTCCTCGCCGATTCCCCGAGGAATGTTCCACCTCCTCCAGGTTCAATCAAAAATCGACTTCCAATTGCTCTAATCACCGCGGCGTTTCAATCCGAGCCGTAGCGGGAGTAGTCGAGTCACGGCGGCCGGCAAAGTGTCTCTACGAAGTTCTCCGGCTGAAACCAGGAGCATCTTCTACGGACATCAAATCGGCTTACCGAAGTCTGGCGAAGGTTTACCATCCCGACACGGCGGCGCGACGCTTGCCGGAGTTTGGCGACGGAGACTTCATCGAGATCCGCAACGCTTACGAGACGCTTTATGATCCGTCGACGAGAGCGGTTTATGACATGTCACTGATGGCGGTGCACGGCGGAAGGAGCCGGCAGTTTTCGGCTCCGGTGACACAGATACGGTATTCTGGATATTATATGAATAGAAGATGGGAAACAGACCAATGCTGGTAG 486 0.5514 MAATLSFASLSAVRPRRFPEECSTSSRFNQKSTSNCSNHRGVSIRAVAGVVESRRPAKCLYEVLRLKPGASSTDIKSAYRSLAKVYHPDTAARRLPEFGDGDFIEIRNAYETLYDPSTRAVYDMSLMAVHGGRSRQFSAPVTQIRYSGYYMNRRWETDQCW 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01137 161 Pfam DnaJ domain 60 123 IPR001623 -
Vifa2g01137 161 ProSitePatterns Nt-dnaJ domain signature. 103 122 IPR018253 -
Vifa2g01137 161 SMART dnaj_3 58 118 IPR001623 -
Vifa2g01137 161 Gene3D DnaJ domain 49 141 IPR036869 -
Vifa2g01137 161 PRINTS DnaJ domain signature 98 118 IPR001623 -
Vifa2g01137 161 PRINTS DnaJ domain signature 79 94 IPR001623 -
Vifa2g01137 161 PRINTS DnaJ domain signature 61 79 IPR001623 -
Vifa2g01137 161 CDD DnaJ 59 115 IPR001623 -
Vifa2g01137 161 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 9 161 - -
Vifa2g01137 161 ProSiteProfiles dnaJ domain profile. 59 126 IPR001623 -
Vifa2g01137 161 SUPERFAMILY Chaperone J-domain 56 132 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01137 Vifa-Chr2 304428177 304428662 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01137 53 123 C2H2 Transcription Factor Family AT1G74250 41.892 5.20e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01137 - - tpra:123912861 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01137 2 304428177 304428662 Vifa2g01137 2 304428177 304428662 ECH