Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01126 ATGGTGTCACTGTTCCGGACCAAAGCCATAGTTAGGTGTAAATTGAGGTGGTGGAATCCTTATATGGTTTTGCAAGTATCAGAGGAATTTGAATGTGAGGGAGTACTTGTAAGTGAAGCAGAGCAACCTGTTCAGTTCACCAAGGTGAATGCAACAAGGTGGAGCCAGGGTTTTAAAAAATGGTTTGCCATGCGAAACAGCTGTGACAAAATGTCATCTTCTCTTGTCATTGTCTTAGATGCATTGGATTACTTATCTGAAAAATACTTGAATAAAAGCCCTCCAGAGTTAGTGAGGGTATCTGCTGTAACTGTGGTTATTTTTTCAGGTTATCTTGAAAACTTTCTGCATGTGAGACTATGGGATCTGCTACTACTATTTGCACTGATAAAACATGTACACTCTATTGAATCAGATGAAGAAGGAGTTGCTCATAATACAACCGGTGGAGTTCATGAATCTAAATCAGTTTCTGATTCAAAATTTGAATTTTCTGGTAGTCCAACAGAAAAGGCAATATTATCTTGGGCTGTTTTGGAATTGAATATGGAGATGGAAACTTTGACAAAAAGTTGCTCTATTCTTCAAGTTGAAACTTTCAACTCAAAGAAGAAAAGAAGTGGAGTTTTGTTGAAAAGAAATGTTGACAACAAAATTAATGCACACTGGAAAGGAGCAGCAGAGATGGTACTGAGAATGTGCTCAAAATACTATGATGCTTATGGCATTGTGAAATATCTTGACAATGAAACCATGTCGAAATTCGAAAGCATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGCATCGCTTTCGCATATGCTGAAGTTGATGTTCAAGAGCTAGGAGATGAACGAGAAAACAGCGGGATAGTGGTAAAAGACAATGGTTTAACATTGTTAGGACTTGTTGGTATTAAGGATTCGTGTCGTTCTGGGGTGAAGACTGCGGTGGAAGCTTGCCAACATGCTGGTGTGAATGTCAAAATGATTACAGGTGACAATATTTTCACTGCAAAAGCTATAGCATTTGAATGTGGGATTCTTCAACCTAATCAAGACACAGATGAAACCGTGGTTGAAGGCGAACAATTTTGCAACTTCACGCACGAAGAAAGGTTAGAGAAAGTTGAAAAATCAGTGTGA 1146 0.3857 MVSLFRTKAIVRCKLRWWNPYMVLQVSEEFECEGVLVSEAEQPVQFTKVNATRWSQGFKKWFAMRNSCDKMSSSLVIVLDALDYLSEKYLNKSPPELVRVSAVTVVIFSGYLENFLHVRLWDLLLLFALIKHVHSIESDEEGVAHNTTGGVHESKSVSDSKFEFSGSPTEKAILSWAVLELNMEMETLTKSCSILQVETFNSKKKRSGVLLKRNVDNKINAHWKGAAEMVLRMCSKYYDAYGIVKYLDNETMSKFESIIQGMAASSLRCIAFAYAEVDVQELGDERENSGIVVKDNGLTLLGLVGIKDSCRSGVKTAVEACQHAGVNVKMITGDNIFTAKAIAFECGILQPNQDTDETVVEGEQFCNFTHEERLEKVEKSV 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01126 381 PANTHER CATION TRANSPORTING ATPASE 137 379 - -
Vifa2g01126 381 Pfam Cation transport ATPase (P-type) 155 236 - -
Vifa2g01126 381 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 151 314 IPR023299 GO:0000166
Vifa2g01126 381 Gene3D - 306 380 IPR023214 -
Vifa2g01126 381 Gene3D - 117 305 IPR023299 GO:0000166
Vifa2g01126 381 SUPERFAMILY HAD-like 291 378 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01126 Vifa-Chr2 303214256 303219015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01126 141 379 Primary Pumps ATPases AT3G63380 56.667 4.47e-82 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01126 K01537 - gmx:100793918 371.703