Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01115 ATGCCACAAGAGGTGTCAAAATCACAAAACTCATTTTTCTCATCTCCTTCAAAAAGAGGATTGAAAGGTCTAGTTTCTATGAACATCAAAGAGGAGGAGAGTTTCAATGATTATGATTTGGCTCACAGAAAAGCAGAAGAAGCAGGTTCAAGGCGCTACGAAGCCTCAGAATGGCTCCGTCAAATGGACAACGTCGCATCTTCCTTCCTACCTCCAAAACCCTCACAGCAACAGTTCTACCTCGCGCTTCGCAACGGTATCATTCTCTGCAACGTCCTCAACAGAGTCAATCCCGGTGCTGTTGTCAAAGTGGTGGACAATTCTGCACTTGCGGCTGCTTCTACGGTAGAAGGAGCCGCGCATTCCGCGATTCAGTATTTTGAGAACATGAGGAACTTTCTTTATGCTGTTAAGGATATGCAGTTACTGACTTTTGAAGCTTCTGATTTGGAGAAGGGGGGTTCATCGAATAAAGTTGTGGACTGCATTCTATGTTTGAAGGGATACTATGAATGGAAACTATCTGGGGGAGTTGGTGTTTGGAGGTATGGTGGAACTGTGAGAATTACTTCCTTACCAAAGAGGTCTCCTTCTTCCTCCATAGTTGGCAGTGAAAGTGCAGATGATTCACTGGATGAGTCTGAGTCATCGCAACTTCTTCAGGCTTATATTAGAGAGACAGATGGGATTGATGATCTGCCTTTGAATACAATGGTAATTGATGCCTTACTCAGCAAGGTAGTCAAAGATTTCTCATCTTTTCTTGTTTCTCAAGGCACAGAGCTTGGACTTTTCCTGAAGAAAATACTAAAAGGGGATATTGGTTGTCTCTCAAAGACAGAGTTTGTAGAAGCTATCTCACTATATCTTAATCAAAGAAGTATTTTGGCATCAAATGATTTCTCCAAATTCTGCATTTGTGGTGGCAAGCGTGATATTCTTCGACAAAATGTCAATTACTCTGCCAAATATTCTGAAGTAATCAATACTCAACAGAAACAACTTGAGACTGTGAAATACTTCTTTGAAGATACAAAACTCGAAGTCAAGCAAATTCAATCAGAGTGGGAACAAGAATTTAGTAGGCTAGAGCATCATATTAAGAGCCTTGAAGTGGCCTCCTCTTCTTACCACAAAGTCTTGGAAGAGAACCGTTTTCTTTACAACCAAGTACAAGACCTCAAAGGAGCAATTAGGGTTTATTGTAGAGTGAGACCCTTCTTAACGGGACAATCAAATGTGCAGTCTACTGTAGACTATATTGGAGAAAATGGAGACATGATGATTGTGAATCCCTTCAAGCAAGGAAAAGATGCAAGAAGGGTATTTTCATTCGATAAGGTGTTTGGAACAAGTGTAACACAAGAACAAATTTATGCTGACACTCAACCGTTGATCAGATCTGTTTTAGATGGTTATAATGTATGTGTCTTTGCATATGGACAGACCGGTTCTGGGAAGACATACACGATGAGTGGTCCCGATCTGTCAGCTGAAGAGACATGGGGTGTAAACTATAGGGCTTTACGTGATTTATTTTATATATCAAAGGAAAGATCAGATTCCATAAAATATGAAGTTTTCGTCCAGATGATTGAAATATACAATGAACAAGTGAGAGATTTATTAGTCAGTGATGGCTCTAACAGAAGATATCCTTTAAATATACGAAACACTTCCCAGCTGAATGGCCTCAATGTGCCTGATGCATTTTTAGTTCCAGTTACTTGCACTCGAGATGTTCTAAATTTAATGAAAATTGGTCAGAAAAACCGTGCTGTAGGTGCTACAGCTCTAAATGAGAGAAGCAGTCGTTCTCATAGTGTTTTCACTGTTCATGTTCGAGGCAGGGAGTTAGTTTCTAAGTCCATTCTTAGGGGTTGTCTCCATCTCGTGGATTTGGCTGGTAGTGAGAGAGTTGACAAATCTGAGGCTGTTGGTGAGAGATTAAAGGAGGCCCAACATATAAATAGATCACTTTCAGCACTTGGGGATGTTATTTCTGCTTTGGCACAGAAAAGTCTACATATCCCTTACCGAAATAGCAAGCTCACACAAGTATTACAAGATTCTTTAGGAGGGCATGCAAAAACTTTGATGTTTGTTCATATTAATCCTGAACTTAATGCTATTGGGGAGACAATTAGTACACTCAAGTTTGCCGAGAGGGTTGCATCCATTGAACTTGGAGCTGCTCAATCTAATAAAGAAACTGGTGAAATTCGAGAACTGAAGGAAGAGGTATCAAGTCTCAAATTAGCATTGGAAAGAAAAGAAGCAGAACTGGAGCAGTGGAAAGCTGGGAATACTCGAAATGCTACAGAGTCTCCAAAACGAAGAGCTATTTCACCTTATCATTTACCCAAATATAGCACCAGTGGCAGCATTAAGCCTGAAACTAGTCAAAGACTCATTGATGATAGAAACATTGAGGCTAGAAGCTGCTCTTCGGGTAAACAAAGAAGGTCAAGGTTTCCCTCAGCATTTATGGACAAGGAGTCCATACCAAAAATGCCACTTCTCACTGAAGAAAAATTAGCGAGCTCAAGGAAAGGAAGATCACCTTCACCTCCAGTTAGAAGATCAACATCCACCGACAGAGGGTCAGTCATTAAAAGCAAGTTAAAAAATGAAACAACAGACAACCAGCCAGTATTGAAGCATCCATTTCCAGCTAGAGTACCTGTTAACAAATTTCTTGCCACAATGCCAATGGTTGCACCCCTTGAGAATAATGCAAGATTGCATGTGAATTCACCAGAGCCAGTAAAACTCGAAGAGGAACAATTCAAGCAAGCACTAACTGCTGTAAGACAAGGCGGTATTAGGAAAAGCAAGGTTGAAACTAAGGCTAAGGCCAAACATCATCTACCATCTCCCTTAAAGATTCAAAAGCCTGAGTTGATCCCGTTGTTTACTTCTGGCATCGAATATGCTGGTGAAAAGACAGTGGAGACACCTCCAAAGAGTAATCACTCTGAGCCCGAAAATGATCTTAGATTTATTGAATCTGCTGGTCGTGGTGCTTTGAATCACAATAAGATACGTCAGAACATATCAAGGAATTTTCAGAACCTTGAATCAAGAGGAATAGTGCAAGCGGAAGAGCCTTTATCAGCTAGAAAAGTTGAAAACAAACTTTTGAATGGTTCAGGTAGTAATCATAATGAAGGAAATAATACATCCATGCCTGAATTTAGAAGGAGCCGATCTACCCCTCGCAGAAAGTTTTTTGGTTTATCTTGA 3246 0.4042 MPQEVSKSQNSFFSSPSKRGLKGLVSMNIKEEESFNDYDLAHRKAEEAGSRRYEASEWLRQMDNVASSFLPPKPSQQQFYLALRNGIILCNVLNRVNPGAVVKVVDNSALAAASTVEGAAHSAIQYFENMRNFLYAVKDMQLLTFEASDLEKGGSSNKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSLPKRSPSSSIVGSESADDSLDESESSQLLQAYIRETDGIDDLPLNTMVIDALLSKVVKDFSSFLVSQGTELGLFLKKILKGDIGCLSKTEFVEAISLYLNQRSILASNDFSKFCICGGKRDILRQNVNYSAKYSEVINTQQKQLETVKYFFEDTKLEVKQIQSEWEQEFSRLEHHIKSLEVASSSYHKVLEENRFLYNQVQDLKGAIRVYCRVRPFLTGQSNVQSTVDYIGENGDMMIVNPFKQGKDARRVFSFDKVFGTSVTQEQIYADTQPLIRSVLDGYNVCVFAYGQTGSGKTYTMSGPDLSAEETWGVNYRALRDLFYISKERSDSIKYEVFVQMIEIYNEQVRDLLVSDGSNRRYPLNIRNTSQLNGLNVPDAFLVPVTCTRDVLNLMKIGQKNRAVGATALNERSSRSHSVFTVHVRGRELVSKSILRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSLHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNAIGETISTLKFAERVASIELGAAQSNKETGEIRELKEEVSSLKLALERKEAELEQWKAGNTRNATESPKRRAISPYHLPKYSTSGSIKPETSQRLIDDRNIEARSCSSGKQRRSRFPSAFMDKESIPKMPLLTEEKLASSRKGRSPSPPVRRSTSTDRGSVIKSKLKNETTDNQPVLKHPFPARVPVNKFLATMPMVAPLENNARLHVNSPEPVKLEEEQFKQALTAVRQGGIRKSKVETKAKAKHHLPSPLKIQKPELIPLFTSGIEYAGEKTVETPPKSNHSEPENDLRFIESAGRGALNHNKIRQNISRNFQNLESRGIVQAEEPLSARKVENKLLNGSGSNHNEGNNTSMPEFRRSRSTPRRKFFGLS 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01115 1081 MobiDBLite consensus disorder prediction 766 869 - -
Vifa2g01115 1081 Pfam Calponin homology (CH) domain 52 171 IPR001715 GO:0005515
Vifa2g01115 1081 MobiDBLite consensus disorder prediction 1 20 - -
Vifa2g01115 1081 MobiDBLite consensus disorder prediction 1 17 - -
Vifa2g01115 1081 FunFam kinesin-like protein KIN-14F 392 768 - -
Vifa2g01115 1081 Pfam Kinesin motor domain 403 727 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa2g01115 1081 CDD CH_AtKIN14-like 51 167 - -
Vifa2g01115 1081 ProSiteProfiles Calponin homology (CH) domain profile. 49 171 IPR001715 GO:0005515
Vifa2g01115 1081 SMART kinesin_4 395 735 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa2g01115 1081 PANTHER KINESIN-LIKE PROTEIN KLP-3 56 912 IPR027640 GO:0003777|GO:0007018
Vifa2g01115 1081 Gene3D - 41 171 IPR036872 -
Vifa2g01115 1081 ProSiteProfiles Kinesin motor domain profile. 397 727 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa2g01115 1081 MobiDBLite consensus disorder prediction 193 214 - -
Vifa2g01115 1081 MobiDBLite consensus disorder prediction 1047 1067 - -
Vifa2g01115 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 398 764 IPR027417 -
Vifa2g01115 1081 SMART ch_5 51 169 IPR001715 GO:0005515
Vifa2g01115 1081 Coils Coil 734 768 - -
Vifa2g01115 1081 Gene3D Kinesin motor domain 340 729 IPR036961 -
Vifa2g01115 1081 FunFam kinesin-like protein KIN-14F 41 171 - -
Vifa2g01115 1081 MobiDBLite consensus disorder prediction 855 869 - -
Vifa2g01115 1081 SUPERFAMILY Calponin-homology domain, CH-domain 45 199 IPR036872 -
Vifa2g01115 1081 PRINTS Kinesin heavy chain signature 628 646 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa2g01115 1081 PRINTS Kinesin heavy chain signature 677 698 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa2g01115 1081 PRINTS Kinesin heavy chain signature 597 614 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa2g01115 1081 PRINTS Kinesin heavy chain signature 472 493 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa2g01115 1081 MobiDBLite consensus disorder prediction 1047 1081 - -
Vifa2g01115 1081 MobiDBLite consensus disorder prediction 801 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01115 Vifa-Chr2 301581216 301591552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01115 388 727 Calmodulin-binding Proteins AT5G65930 42.899 4.71e-75 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01115 K10406 - gmx:100786466 1666.74