Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01092 ATGGAAATTGGTATAGAGGATGAGATTGTGGACATGTCAATGCCACCTCCATTAAATGGTCCCATGAACATAGCAAGGAACAGTGATTTTGGTCACAACAAGGAGTTTATGTCTAGGGATGCATACCTTAGGAATAGATACTCAGAGATTGATATAGAAGTTGAAGATTCAAGTTCAAACCAAAATGGCCCCCTCCCCATATTTCTAAAGTTTGAAGATGTAGAGTTTAAGGTGAAAAACATTCAATTAGGCTCTAATAATCCTGTGAAAGCAATGGTGACAAAGGTATCAACACAACACACTGTTGAACAAGATAAGTACAAGAGAATTTTGAAGGGAATTACTGGAAGCATTGGCCCTGGTGAAATTCTTGCTCTGATGGGTCCTTCTGGCAGTGGAAAAACAACACTTTTGAGAGTTATTGGAGGAAGACTGCTTGACAATGTAAAAGGAAAAATAACTTACAATGATGTTAAATATACTCCAGCTGTCAAGAGAAGGATTGGTTTTGTGACACAAGAGGATATACTTTTCCCACAATTAACTGTGGAAGAAACATTAGTCTTTTCGGCATTCTTAAGGCTACCAACCAATATGAACAAGCAACAAAAATATGCAAAAGTGGAAACAACTGTGAAGGAGCTAGGCCTTGAAAGATGTCGCCACACGAAAATAGGTGGAGGATTTCTCAAAGGCATATCAGGAGGAGAAAGGAAAAGAACAAGCATAGGTTATGAAATTCTTGTTGATCCTTCATTGTTGTTGCTTGATGAACCAACTTCAGGTCTTGATTCTACTTCAGCAAACAAACTCCTTGTCACACTTCAAGGACTTGCTAAGGCTGGAAGGACCATAATCACAACAATACACCAGCCATCAAGCAGAATCTTTCACATGTTTGACAAACTTCTTTTGATATCGGAAGGATATCCTATTTACTATGGAACAGCTAGAGAGACAATAGAGTACTTTTCGTCGTTGAGGTTCAGCCCGGAAATAGCAATGAATCCTGCAGAATTCTTGCTTGACTTGGCAACTGGACAAGTGGATGGCATAAGTGTTCCAACAGATATTTTTGATGATCAAGAATCTGCTCATGACTCTTCAAAAGCTGTTATTAATTATCTACAACACAAGTACAAAACTCTACTAGAGCCAAAAGAAAAAGAGAATCATAGAGGAGTAACCACACCGGAACATCTTCAGGTAGCAATTCAGGTTAAGAAAGAGTGGACATTGAGTTGGTTGGACCAATTCGTGATTCTTTCAAGGAGAACATTTAGATCAAGAAGCAAAGACTATTTTGACAAGTTAAGACTAGTTCAAGCACTTGGAGTAGCACTTTTGTTAGGGCTGCTTTGGTTGAAATCTTCAACCAACACAGAAGCTCAACTTAGAGACCAGGTTGGTTTAGCCTTCTACATCTGTATATTCTGGACATCTTCATGCATTTTCGGAGCAGTCTACGTGTTTCCATTTGAAAAATACTACTTGATAAAAGAAAGAAAAGCCGACATGTATAGATTAAGTGTATACTATGTATGCAGCACTCTATGTGACATGGTAGCACATGTTTTCTATCCAACTTTTTTCATGATCATTGTCTACTTCATGGCTGGATTTAAGAGAACCGTCGCTTGCTTCTTCCTCACATTGCTCGTCGTTCTACTAATAGCTATAACAAGTCAAGGTGCAGGAGAATTGTTTGGAGCTGCGGTTATGAGTATTAAAAGAGCAGGAATGGCTGCATCATTGATACTGATGTTATTCCTTCTTACCGGTGGCTACTATGTCCAGCATATACCGAAGTTCATGCAATGGTTGAAGTATCTTTCATTCATGTACTATGGTTTTAGGCTTCTTTTAAAAGTGCAATATTCAGGAGATGAGTTATATGATTGTGAAAGTAAAGGAGGGTGTAGGCCATTGCAGAGTTCACCATCATTTGCTACTGTGAACTTGAAAGGTGGTTGGAAAGAAGTTTGGGTTATGTTAGCTATGGCTATGTGTTTTCGTTTGTTGGCTTATTTATGTCTTCGTAGAAAAATTGATGTTTGA 2058 0.3848 MEIGIEDEIVDMSMPPPLNGPMNIARNSDFGHNKEFMSRDAYLRNRYSEIDIEVEDSSSNQNGPLPIFLKFEDVEFKVKNIQLGSNNPVKAMVTKVSTQHTVEQDKYKRILKGITGSIGPGEILALMGPSGSGKTTLLRVIGGRLLDNVKGKITYNDVKYTPAVKRRIGFVTQEDILFPQLTVEETLVFSAFLRLPTNMNKQQKYAKVETTVKELGLERCRHTKIGGGFLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANKLLVTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGTARETIEYFSSLRFSPEIAMNPAEFLLDLATGQVDGISVPTDIFDDQESAHDSSKAVINYLQHKYKTLLEPKEKENHRGVTTPEHLQVAIQVKKEWTLSWLDQFVILSRRTFRSRSKDYFDKLRLVQALGVALLLGLLWLKSSTNTEAQLRDQVGLAFYICIFWTSSCIFGAVYVFPFEKYYLIKERKADMYRLSVYYVCSTLCDMVAHVFYPTFFMIIVYFMAGFKRTVACFFLTLLVVLLIAITSQGAGELFGAAVMSIKRAGMAASLILMLFLLTGGYYVQHIPKFMQWLKYLSFMYYGFRLLLKVQYSGDELYDCESKGGCRPLQSSPSFATVNLKGGWKEVWVMLAMAMCFRLLAYLCLRRKIDV 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01092 685 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 325 IPR027417 -
Vifa2g01092 685 Pfam ABC-2 type transporter 418 626 IPR013525 GO:0016020|GO:0140359
Vifa2g01092 685 SMART AAA_5 120 311 IPR003593 GO:0016887
Vifa2g01092 685 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 96 333 IPR003439 GO:0005524
Vifa2g01092 685 FunFam ABC transporter G family member 22 98 327 - -
Vifa2g01092 685 Pfam ABC-2 type transporter 290 350 IPR043926 GO:0140359
Vifa2g01092 685 Pfam ABC transporter 111 261 IPR003439 GO:0005524
Vifa2g01092 685 CDD ABCG_EPDR 106 315 - -
Vifa2g01092 685 Gene3D - 93 328 IPR027417 -
Vifa2g01092 685 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 56 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01092 Vifa-Chr2 295610747 295614530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01092 109 319 Calmodulin-binding Proteins AT2G36910 28.837 3.00e-12 68.6