Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01082 ATGGTAAGAAACAATCCCAAATTTGTAATTACAATGATTTTATTTCTATTATTGTCATTACCATTAGTCTCATGTGAAGAATGTTCATCGAAATCCAAAGGTGGTTGTCACGATAGAAATGAAGCATTAAGGTTAAAGATCATTGCAATATTTTGCATATTATTGTCAAGCATGATTGGTATTTGTATTCCAATTTTCTCAACTTCGATTCCGGCTTTAAAACCCGACGGAGACTTGTTCGTCGTTATAAAAGCTTTCGCCTCCGGTGTTATACTCGCTACCGGTTATATGCATGTGATGCCAGATTCATTTGCCGATTTAACTTCTCCTTGTTTGCCTCAACACCCTTGGCATAAATTCCCATTCACCACTTTCATTGCTATGATATCTGCTGTTTTTACTCTCATGGTTGATTCATTTTCAATAAGTTACTTTAAAAAGAAACTTCCCATGTCTTCCTCTTTGAATAATAATTTGGAAACGACAAAGGAATTTGAACTTGATCATGGACATGGTCTTGCAATTGCAAATGGACATGACAAGAATGTGAATGCTGAACAATTGCTTCGTTACCGTGTTGTCGCTCAGGTTTTGGAGTTAGGAATTGTGGTGCACTCAGTAGTCATTGGTTTGTCAATGGGTGCTTCAGAGAATCCTTGCACAATAAAACCTCTCATTGCTGCACTTTGCTTCCATCAACTCTTTGAGGGAATGGGTTTGGGCGGCTGCATACTTCAGGCTGATTACGAAGTGGAGATGAAAGCGATAATGATATTTTTTTTCTCAGTGACAACTCCATTTGGGATAGCATTAGGGATTGGTTTATCAAAAGTGTATAGTGACACCAGTCCAACTTCACTAATTATAGAAGGGATTCTAAATGCTATATCTGCAGGGCTTCTCAATTATATGGCACTTGTTGATTTATTGGCTAATGATTTTATGGGTACAAAGTTGCAAAGTAGAATCAAGCTTCAATTATTGTCTTATATAGCTGTTTTGCTAGGTGCAGGAGGCATGTCGGTCATGGCAATTTGGGCGTAA 1044 0.3774 MVRNNPKFVITMILFLLLSLPLVSCEECSSKSKGGCHDRNEALRLKIIAIFCILLSSMIGICIPIFSTSIPALKPDGDLFVVIKAFASGVILATGYMHVMPDSFADLTSPCLPQHPWHKFPFTTFIAMISAVFTLMVDSFSISYFKKKLPMSSSLNNNLETTKEFELDHGHGLAIANGHDKNVNAEQLLRYRVVAQVLELGIVVHSVVIGLSMGASENPCTIKPLIAALCFHQLFEGMGLGGCILQADYEVEMKAIMIFFFSVTTPFGIALGIGLSKVYSDTSPTSLIIEGILNAISAGLLNYMALVDLLANDFMGTKLQSRIKLQLLSYIAVLLGAGGMSVMAIWA 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01082 347 PANTHER ZINC/IRON TRANSPORTER 42 344 - -
Vifa2g01082 347 Pfam ZIP Zinc transporter 44 344 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vifa2g01082 347 NCBIfam ZIP zinc/iron transport family 28 347 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01082 Vifa-Chr2 291831478 291832784 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01082 1 347 Inorganic Solute Cotransporters AT1G31260 56.319 4.17e-137 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01082 K14709 - gmx:100784872 463.766