Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01068 ATGACTGCTTCTGTCTCCAAATTCGTGTTATTATTTTCTATGCTAGTAATTGTTCTTGTTGCTTTGCAATTCAAGGGTGGCGAGAGTAGTTCATTCCAAAATGATAAAGTAACATTAACGATCACCAACACCTTACAAAACAACATTCAGCTTGGCCTTCATTGTCAATCTAAAGATGATGATCTTGGAGTCCATACACTAAGAACTTCACAAAGTTTTGCCTTTACCTTTAGGCCTAACTATTTTACAATTGATACCTTGTATTTTTGTAGGTTTACATGGGCTAGTGAAGTTCACTACTTTGATGTTTATGTTCAAAGGAGAGATTTTGAATCAGATGACTGTAGACGTACATGTGATTATAAAATAAAGGAATCAGGACCGTGTAGGGGGGGTGGTCATTGTTTCCCTTGGAATAAGAATGTTGTGGTAGAAGGGAGACAATTTGATGAAAAAAATATCACTCTTGATGTGTAA 477 0.3585 MTASVSKFVLLFSMLVIVLVALQFKGGESSSFQNDKVTLTITNTLQNNIQLGLHCQSKDDDLGVHTLRTSQSFAFTFRPNYFTIDTLYFCRFTWASEVHYFDVYVQRRDFESDDCRRTCDYKIKESGPCRGGGHCFPWNKNVVVEGRQFDEKNITLDV 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01068 158 Pfam Plant self-incompatibility protein S1 39 130 IPR010264 -
Vifa2g01068 158 PANTHER - 35 131 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01068 Vifa-Chr2 287692319 287692795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01068 28 139 Carbohydrate Esterase AT3G16970 40.833 6.94e-27 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01068 - - cam:101507265 146.362