Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01046 ATGATGTATACATTCACTTCAATGGCTGCTTTTGGTAAGAAATATTCAGAACAAGAAGAGTTCATATCATTTGTACAACAACTTATAAAACTTGCTGGAGGGTTCTATATTGGCGACTTGTTTCCTTCAGCTAAATGGATTCAAAATCTCCCTGGAATGAGGCCTAAGATTGAGAAGTTAAGCCAACAAGTAGACAAGATATTAGAACATATCATCAATGACCATAAAGAAGCAAGATCAAGAAGAGATAAACAAGGTTTGGCTGATGAAGATGAAGATCTGATGCATAGTCTTTTAAAATTTCATGACAATGAGAGGGATTCAGATTTTCATTTAACCTCTGATAATGTCAAGGCCATAATTTTGGATATGTTCACTGGTGGAAGTGACACAGCGGCATCTCTCATTAACTGGACAATGGCTGAGATGTTAAAGGATACTAGAGTTTTGAAGAAAGAACAAGCTGAAGTTAGAGAAGGGATTAATAGGAGAGGTAAGATTGATGATGCTACATTTAAAGAATTTAATTATTTAAAAGCCGTAATCAAAGAGTCACTAAGATTACACCCTTCTGTTACTCTTTGTGATACGGTGGAAGAACCGACTGTTAATATACTGGTTTTGTGTTTGTGTTTGCAAATGTGTGATAAGCAAGAGTCGCCACCAGCTTTTCTTTTATCCGACAAAGGAAAGGGTGAAAAGAACAGAAAAAGACCTTTTTCGAGAGTTTCTGATTAA 738 0.3577 MMYTFTSMAAFGKKYSEQEEFISFVQQLIKLAGGFYIGDLFPSAKWIQNLPGMRPKIEKLSQQVDKILEHIINDHKEARSRRDKQGLADEDEDLMHSLLKFHDNERDSDFHLTSDNVKAIILDMFTGGSDTAASLINWTMAEMLKDTRVLKKEQAEVREGINRRGKIDDATFKEFNYLKAVIKESLRLHPSVTLCDTVEEPTVNILVLCLCLQMCDKQESPPAFLLSDKGKGEKNRKRPFSRVSD 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01046 245 PANTHER OS08G0105600 PROTEIN 4 194 - -
Vifa2g01046 245 PRINTS P450 superfamily signature 127 144 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01046 245 PRINTS P450 superfamily signature 180 191 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01046 245 MobiDBLite consensus disorder prediction 229 245 - -
Vifa2g01046 245 SUPERFAMILY Cytochrome P450 5 194 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01046 245 Pfam Cytochrome P450 1 193 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01046 245 PRINTS E-class P450 group I signature 136 162 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01046 245 PRINTS E-class P450 group I signature 116 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01046 245 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01046 245 PRINTS E-class P450 group I signature 1 19 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01046 245 Gene3D Cytochrome P450 1 204 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01046 245 MobiDBLite consensus disorder prediction 225 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01046 Vifa-Chr2 283360135 283360966 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01046 7 194 Cytochrome P450 AT3G48310 34.043 2.68e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01046 - - lja:Lj0g3v0164489.1 249.98