Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01042 ATGGAGCTTGAGCCCAAAATAATTTCATCTCCCATCTTCTTATTCTCCATCTTTTTATTCATAATATTTACCCTAATTTGGAGCTCAACTAAACCAAAATCTTCAAACTCCAAGTTACCACCAGGACCACCAAAACTACCTCTTATAGGAAACATACACCAACTTGGTTCAATGCCTCATCATAGCCTAAAAAAATTATCACAAAAATATGGACCATTAATGCATATAAAACTAGGTGAAATTCCAATCATAGTTGTATCTTCACCTGAAATCGCCAAACAAATAATGAAAACACATGACACAAAGTTTTCAAACAGGCCACATCTTGTAGCTGCTGATATCATAACCTATGGTACAAAAGGCATAACATTTTCACCTTATGGTACTTATTGGAGACAGATGAGAAAAATTTGCACCTTTGAACTATTAACATCAAAATGTGTTGAATCGTTTCGATCGATTCGGGAAAATGAGGTGTCAAATATTGTGAAAGAGATAAGGTTGAATGAAGGGTCATCTATAAATCTAAGTAAGATGATTGGTTTATTTTCTTATAGCTTAACATCAAGGATTGCGTTAGGAGCAAAATCTGAAGATCAAGAAGCTTTTATGGTTGCTATGAAGGATGTTTTGAAGCTAATTGGTGGTTTTTCTGTAGCTGATTTGTTTCCTTCGTTTAAAGTGCTTCATGTTTTAACAGGTATAAGGTCTAAATCTGAGAAGGTACATAAAGAAATAGATAGGATTCTTGAGAAAATTCTTAGATATCATAAACTGGATATAAGTTTAGAATCAAAGATAATCGATGAAAAAGATGGTGAAGATTTTGTTGATGTGCTGCTAAGGCTTCAGATGGAGAACAACCTTGAACATCCTCTATCTGACAGTATTATTAAAGCAAACATGTTGGATATATTTAGTGCTGGAAGTGGTACATCATCGAAAACTTCAGAATGGGCAATGTCAGAACTTATCAGAAACCCGACATTGATGAAAAAAGCACAAATTGAGGTAAGAAGAGTGTTTGATGCAAAAGGGTATGTAGATGAAGCAAAGATTCATGAGCTAGAGTACTTAAAGTTAGTAATAAAAGAAACCTTGCGTCTGCATGGTCCAGTTCCGTTGTTACTACCAAGAGAATGCAGTGAAAGATGTGAAATAAATGGATATGAGATACCGGCTAAGACTAAGGTCATAGTTAATGCTTATGCAATTGGAATGGATCCAAACAATTGGAATGAACCTAAGAAGTTTTGCCCAGAAAGGTTCATTGATAGTGAAATTGATTACAAAGGTGTGGATTTTCAGTTTATTCCATTTGGTGCTGGAAGAAGGATGTGTCCGGGTATAACATTCGGTGTTGTGAATGTTGAAATATTACTAGCAAACTTGCTTTTTCATTTTGATTGGAAAATGGTTGACGGAAATAAGGGAGAAGAACTTGACATGAGTGAATCATTTGGTTTGACTCTAAAAAAGAAACATGATTTGTACTTGATTCCTATTATGTATCATTCATCTCCGAAGTCCTAA 1533 0.3464 MELEPKIISSPIFLFSIFLFIIFTLIWSSTKPKSSNSKLPPGPPKLPLIGNIHQLGSMPHHSLKKLSQKYGPLMHIKLGEIPIIVVSSPEIAKQIMKTHDTKFSNRPHLVAADIITYGTKGITFSPYGTYWRQMRKICTFELLTSKCVESFRSIRENEVSNIVKEIRLNEGSSINLSKMIGLFSYSLTSRIALGAKSEDQEAFMVAMKDVLKLIGGFSVADLFPSFKVLHVLTGIRSKSEKVHKEIDRILEKILRYHKLDISLESKIIDEKDGEDFVDVLLRLQMENNLEHPLSDSIIKANMLDIFSAGSGTSSKTSEWAMSELIRNPTLMKKAQIEVRRVFDAKGYVDEAKIHELEYLKLVIKETLRLHGPVPLLLPRECSERCEINGYEIPAKTKVIVNAYAIGMDPNNWNEPKKFCPERFIDSEIDYKGVDFQFIPFGAGRRMCPGITFGVVNVEILLANLLFHFDWKMVDGNKGEELDMSESFGLTLKKKHDLYLIPIMYHSSPKS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01042 510 CDD CYP71-like 69 497 - -
Vifa2g01042 510 FunFam Cytochrome P450 71D8 32 501 - -
Vifa2g01042 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Vifa2g01042 510 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01042 510 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01042 510 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01042 510 Pfam Cytochrome P450 40 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01042 510 PANTHER CYTOCHROME P450 71B11-RELATED 25 502 - -
Vifa2g01042 510 Gene3D Cytochrome P450 25 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01042 510 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01042 510 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01042 510 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01042 510 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01042 510 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01042 510 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01042 510 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01042 510 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01042 510 SUPERFAMILY Cytochrome P450 40 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01042 Vifa-Chr2 281728091 281730207 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01042 12 504 Cytochrome P450 AT3G26300 41.434 6.85e-138 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01042 - - gmx:100818000 704.516