Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00921 ATGACCAGGTTAGCCAGTGTTACTCTTCTCAATCTCACTCGCTTCCCCTCTTCTTCTTATCATTATTCCAAGCGTTTTTTCACTCACACTCGTAAACTCAACCATTTCAACACCCCAAAATTTTCTCTCTCTTCCAAAACACTGTTTCAACGACGTCGTTTACGCTACTTCAACACCTCCGCAAAGGTAACAATGGCTTCTGATACAATCACTGCCCCTTATGGCTCTTGGAAATCACCCATCACTGCTGATGTCGTCTCCGGCGCTTCCAAGAGTCTTGGTGGAACCGCGGTTGATGGTAGTGGTCGTCTTGTTTGGCTTGAGTCACGTCCGACTGAATCAGGACGGGCAGTCCTTGTTCTTGAGCCGCAATATCCAGGGGGCGAGGCTGTAGACATTACACCGAAGGAATTTGGAGTGAGAACATTGGCTCAGGAATATGGTGGTGGTGCTTTCACAGTTTCAGGAGATGTTGTCTTTTTTGCTAATTACAAGGATCAGAGATTATACAAACAATCCATCTCTTCTCTTGATGTGTCTCCTATACCTCTCACTCCGGATTATGGTGTACCGACTGTAAGCTATGCAGATGGAGTATTGGATACACGCTTTAACCGTTTTATTGCTGTAAGGGAAGATCGTAGGGAAAGCAGTCAAAATCCACCTACGACTATTGTATCCATAGCACTCGGGAACAAGGATGTTCAGGAGCCAGAAGTACTAGTTGGTGGGAGTGATTTCTATGCTTTCCCACGTCTAGATCATAAAAGTGAGAGAATAGCATGGATACAATGGAGTCACCCCAACATGCCATGGGATAAATCAGAACTTTGGGTTGGTTACATTTCTGAAAATGGAGAGATCTACAAGAGTGTCTGTGTAGCTGGGTATGATCCTTCAGTTGTAGAGTCTCCAATTGAGCCCAAGTGGTCCTCAGATGGGGAACTGTTTTTCATCACGGATAGGGAAAGTGGTTTTTGGAATCTCCATAAATGGATTGAGTCAGAAAATAAGGTCGTACCTGTTTATTCTTTGGATGCTGAGTTTGCAAGGCCACTGTGGATTTTCGGTATGAATTCTTATGAATTTGTGCAAAGTCCGAAACAGAAAAAACTAATTGCTTGCAGTTACAGGCAGAAGGGGAAATCGTATCTCGGTATTATCGATGATGTGCCGGGCTCAAAACTAACCGTGCTTGATATCCCTTTCACAGATATATATAACATTACTTCTGGCACTGATTTCCTATTCGTGGAAGGAGCATCTGCCGTTCATTCATCATCGGTGGCCAAGGTGACATTAGATGACAATAAATCGAAAGTAGCGTACTTCAATATTATTTGGTCCTCTTCACCAGATAGTTTAAAATATAGTCCGTACATCAGTAAGCCCGAGTTGATTGAATTCCCAACTGAAGTTCCTGGGAAAAATGCTTATGCATACTTTTATCCACCATCTAATCCTGAATACCGAGCCGTTGAAGGAGAAAAGCCTCCATTGCTATTGAAGAGCCATGGAGGACCAACGACTGAAACACACGGAGTTTTAAATTTGAGCATTCAGTACTGGACTAGTCGGGGTTGGGCGTTCGTGGATGTTAATTACGGTGGAAGCACTGGTTATGGAAGAGAGTACAGGGACCGGCTTTTAGGACGCTGGGGAATAGTGGATGTCGATGACTGTTGTAGTTGTGCTACATATTTGGCGGACAACGGAAAAGTTGACAGGGAGCGGCTGTGTATAACAGGGGGCTCTGCCGGTGGATATACTACCTTAGCCGCACTTGCTTTTAAAGATACTTTTAAGGCCGGAGCATCTTTGTATGGTGTAGCTGACTTGAAGACATTGGTAGAAGAAACTCATAAATTTGAATCTCACTACATCAATAATCTAGTTGGAGTTGATGAGAAGGTGTGGTTCGATAGATCCCCAATCAATCACGTTGATAAATTTTCTTGTCCGATTATTTTATTTCAAGGATTGGAAGACAAGGTTGTGCCGCCAAGTCAAGCTCACTTAATTTACGAGGCTTTGAAGAAAAAAGGTGTGCCGGTTGTGCTTGTTGAGTATGAAGGAGAACAACATGGTTTCCGAAAGGCTGAGAACATTAAGTATACACTCGAACAACAAATGGTTTTCTTCGCGCGAGTGATTGGAGGCTTCAATGTTGCTGATAACATCATTCCCGTCAAAATTGACAACTTCGACTGA 2211 0.4342 MTRLASVTLLNLTRFPSSSYHYSKRFFTHTRKLNHFNTPKFSLSSKTLFQRRRLRYFNTSAKVTMASDTITAPYGSWKSPITADVVSGASKSLGGTAVDGSGRLVWLESRPTESGRAVLVLEPQYPGGEAVDITPKEFGVRTLAQEYGGGAFTVSGDVVFFANYKDQRLYKQSISSLDVSPIPLTPDYGVPTVSYADGVLDTRFNRFIAVREDRRESSQNPPTTIVSIALGNKDVQEPEVLVGGSDFYAFPRLDHKSERIAWIQWSHPNMPWDKSELWVGYISENGEIYKSVCVAGYDPSVVESPIEPKWSSDGELFFITDRESGFWNLHKWIESENKVVPVYSLDAEFARPLWIFGMNSYEFVQSPKQKKLIACSYRQKGKSYLGIIDDVPGSKLTVLDIPFTDIYNITSGTDFLFVEGASAVHSSSVAKVTLDDNKSKVAYFNIIWSSSPDSLKYSPYISKPELIEFPTEVPGKNAYAYFYPPSNPEYRAVEGEKPPLLLKSHGGPTTETHGVLNLSIQYWTSRGWAFVDVNYGGSTGYGREYRDRLLGRWGIVDVDDCCSCATYLADNGKVDRERLCITGGSAGGYTTLAALAFKDTFKAGASLYGVADLKTLVEETHKFESHYINNLVGVDEKVWFDRSPINHVDKFSCPIILFQGLEDKVVPPSQAHLIYEALKKKGVPVVLVEYEGEQHGFRKAENIKYTLEQQMVFFARVIGGFNVADNIIPVKIDNFD 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00921 736 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 65 731 - -
Vifa2g00921 736 SUPERFAMILY alpha/beta-Hydrolases 464 718 IPR029058 -
Vifa2g00921 736 Gene3D alpha/beta hydrolase 457 723 IPR029058 -
Vifa2g00921 736 Pfam Prolyl oligopeptidase family 519 719 IPR001375 GO:0006508|GO:0008236
Vifa2g00921 736 SUPERFAMILY Tricorn protease domain 2 146 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00921 Vifa-Chr2 243310522 243315805 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00921 10 736 Carbohydrate Esterase AT5G36210 69.368 0.0 1013
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00921 - - tpra:123917153 1267.29