Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00920 ATGACCAGGTTAGCCAGTGTTACTCTTCTCAATCTCACTCGCTTCCCCTCTTCTTCTTATCATTATTCCAAGCGTTTTTTCACTCACACTCGTAAACTCAACCATTTCAACACCCCAAAATTTTCTCTCTCTTCCAAAACACTGTTTCAACGACGTCGTTTACGCTACTTCAACACCTCCGCAAAGGTAACAATGGCTTCTGATACAATCACTGCCCCTTATGGCTCTTGGAAATCACCCATCACTGCTGATGTCGTCTCCGGCGCTTCCAAGAGTCTTGGTGGAACCGCGGTTGATGGTAGTGGTCGTCTTGTTTGGCTTGAGTCACGTCCGACTGAATCAGGACGGGCAGTCCTTGTTCTTGAGCCGCAATATCCAGGGGGCGAGGCTGTAGACATTACACCGAAGGAATTTGGAGTGAGAACATTGGCTCAGGAATATGGTGGTGGTGCTTTCACAGTTTCAGGAGATGTTGTCTTTTTTGCTAATTACAAGGATCAGAGATTATACAAACAATCCATCTCTTCTCTTGCAGATGTGTCTCCTATACCTCTCACTCCGGATTATGGTGTACCGACTGTAAGCTATGCAGATGGAGTATTGGATACACGCTTTAACCGTTTTATTGCTGTAAGGGAAGATCGTAGGGAAAGCAGTCAAAATCCACCTACGACTATTGTATCCATAGCACTCGGGAACAAGGATGTTCAGGAGCCAGAAGTACTAGTTGGTGGGAGTGATTTCTATGCTTTCCCACGTCTAGATCATAAAAGTGAGAGAATAGCATGGATACAATGGAGTCACCCCAACATGCCATGGGATAAATCAGAACTTTGGGTTGGTTACATTTCTGAAAATGGAGAGATCTACAAGAGTGTCTGTGTAGCTGGGTATGATCCTTCAGTTGTAGAGTCTCCAATTGAGCCCAAGTGGTCCTCAGATGGGGAACTGTTTTTCATCACGGATAGGGAAAGTGGTTTTTGGAATCTCCATAAATGGATTGAGTCAGAAAATAAGGTCGTACCTGTTTATTCTTTGGATGCTGAGTTTGCAAGGCCACTGTGGATTTTCGGTATGAATTCTTATGAATTTGTGCAAAGTCCGAAACAGAAAAAACTAATTGCTTGCAGTTACAGGCAGAAGGGGAAATCGTATCTCGGTATTATCGATGATGTGCCGGGCTCAAAACTAACCGTGCTTGATATCCCTTTCACAGATATATATAACATTACTTCTGGCACTGATTTCCTATTCGTGGAAGGAGCATCTGCCGTTCATTCATCATCGGTGGCCAAGGTGACATTAGATGACAATAAATCGAAAGTAGCGTACTTCAATATTATTTGGTCCTCTTCACCAGATAGTTTAAAATATAGTCCGTACATCAGTAAGCCCGAGTTGATTGAATTCCCAACTGAAGTTCCTGGGAAAAATGCTTATGCATACTTTTATCCACCATCTAATCCTGAATACCGAGCCGTTGAAGGAGAAAAGCCTCCATTGCTATTGAAGAGCCATGGAGGACCAACGACTGAAACACACGGAGTTTTAAATTTGAGCATTCAGTACTGGACTAGTCGGGGTTGGGCGTTCGTGGATGTTAATTACGGTGGAAGCACTGGTTATGGAAGAGAGTACAGGGACCGGCTTTTAGGACGCTGGGGAATAGTGGATGTCGATGACTGTTGTAGTTGTGCTACATATTTGGCGGACAACGGAAAAGTTGACAGGGAGCGGCTGTGTATAACAGGGGGCTCTGCCGGTGGATATACTACCTTAGCCGCACTTGCTTTTAAAGATACTTTTAAGGCCGGAGCATCTTTGTATGGTGTAGCTGACTTGAAGACATTGGTAGAAGAAACTCATAAATTTGAATCTCACTACATCAATAATCTAGTTGGAGTTGATGAGAAGGTGTGGTTCGATAGATCCCCAATCAATCACGTTGATAAATTTTCTTGTCCGATTATTTTATTTCAAGGATTGGAAGACAAGGTTGTGCCGCCAAGTCAAGCTCACTTAATTTACGAGGCTTTGAAGAAAAAAGGTGTGCCGGTTGTGCTTGTTGAGTATGAAGGAGAACAACATGGTTTCCGAAAGGCTGAGAACATTAAGTATACACTCGAACAACAAATGGTTTTCTTCGCGCGAGTGATTGGAGGCTTCAATGTTGCTGATAACATCATTCCCGTCAAAATTGACAACTTCGACTGA 2214 0.4345 MTRLASVTLLNLTRFPSSSYHYSKRFFTHTRKLNHFNTPKFSLSSKTLFQRRRLRYFNTSAKVTMASDTITAPYGSWKSPITADVVSGASKSLGGTAVDGSGRLVWLESRPTESGRAVLVLEPQYPGGEAVDITPKEFGVRTLAQEYGGGAFTVSGDVVFFANYKDQRLYKQSISSLADVSPIPLTPDYGVPTVSYADGVLDTRFNRFIAVREDRRESSQNPPTTIVSIALGNKDVQEPEVLVGGSDFYAFPRLDHKSERIAWIQWSHPNMPWDKSELWVGYISENGEIYKSVCVAGYDPSVVESPIEPKWSSDGELFFITDRESGFWNLHKWIESENKVVPVYSLDAEFARPLWIFGMNSYEFVQSPKQKKLIACSYRQKGKSYLGIIDDVPGSKLTVLDIPFTDIYNITSGTDFLFVEGASAVHSSSVAKVTLDDNKSKVAYFNIIWSSSPDSLKYSPYISKPELIEFPTEVPGKNAYAYFYPPSNPEYRAVEGEKPPLLLKSHGGPTTETHGVLNLSIQYWTSRGWAFVDVNYGGSTGYGREYRDRLLGRWGIVDVDDCCSCATYLADNGKVDRERLCITGGSAGGYTTLAALAFKDTFKAGASLYGVADLKTLVEETHKFESHYINNLVGVDEKVWFDRSPINHVDKFSCPIILFQGLEDKVVPPSQAHLIYEALKKKGVPVVLVEYEGEQHGFRKAENIKYTLEQQMVFFARVIGGFNVADNIIPVKIDNFD 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00920 737 Pfam Prolyl oligopeptidase family 520 720 IPR001375 GO:0006508|GO:0008236
Vifa2g00920 737 Gene3D alpha/beta hydrolase 458 724 IPR029058 -
Vifa2g00920 737 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 65 732 - -
Vifa2g00920 737 SUPERFAMILY Tricorn protease domain 2 146 418 - -
Vifa2g00920 737 SUPERFAMILY alpha/beta-Hydrolases 465 719 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00920 Vifa-Chr2 243310522 243315805 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00920 10 737 Carbohydrate Esterase AT5G36210 69.273 0.0 1009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00920 - - tpra:123917153 1262.67