LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa2g00920	ATGACCAGGTTAGCCAGTGTTACTCTTCTCAATCTCACTCGCTTCCCCTCTTCTTCTTATCATTATTCCAAGCGTTTTTTCACTCACACTCGTAAACTCAACCATTTCAACACCCCAAAATTTTCTCTCTCTTCCAAAACACTGTTTCAACGACGTCGTTTACGCTACTTCAACACCTCCGCAAAGGTAACAATGGCTTCTGATACAATCACTGCCCCTTATGGCTCTTGGAAATCACCCATCACTGCTGATGTCGTCTCCGGCGCTTCCAAGAGTCTTGGTGGAACCGCGGTTGATGGTAGTGGTCGTCTTGTTTGGCTTGAGTCACGTCCGACTGAATCAGGACGGGCAGTCCTTGTTCTTGAGCCGCAATATCCAGGGGGCGAGGCTGTAGACATTACACCGAAGGAATTTGGAGTGAGAACATTGGCTCAGGAATATGGTGGTGGTGCTTTCACAGTTTCAGGAGATGTTGTCTTTTTTGCTAATTACAAGGATCAGAGATTATACAAACAATCCATCTCTTCTCTTGCAGATGTGTCTCCTATACCTCTCACTCCGGATTATGGTGTACCGACTGTAAGCTATGCAGATGGAGTATTGGATACACGCTTTAACCGTTTTATTGCTGTAAGGGAAGATCGTAGGGAAAGCAGTCAAAATCCACCTACGACTATTGTATCCATAGCACTCGGGAACAAGGATGTTCAGGAGCCAGAAGTACTAGTTGGTGGGAGTGATTTCTATGCTTTCCCACGTCTAGATCATAAAAGTGAGAGAATAGCATGGATACAATGGAGTCACCCCAACATGCCATGGGATAAATCAGAACTTTGGGTTGGTTACATTTCTGAAAATGGAGAGATCTACAAGAGTGTCTGTGTAGCTGGGTATGATCCTTCAGTTGTAGAGTCTCCAATTGAGCCCAAGTGGTCCTCAGATGGGGAACTGTTTTTCATCACGGATAGGGAAAGTGGTTTTTGGAATCTCCATAAATGGATTGAGTCAGAAAATAAGGTCGTACCTGTTTATTCTTTGGATGCTGAGTTTGCAAGGCCACTGTGGATTTTCGGTATGAATTCTTATGAATTTGTGCAAAGTCCGAAACAGAAAAAACTAATTGCTTGCAGTTACAGGCAGAAGGGGAAATCGTATCTCGGTATTATCGATGATGTGCCGGGCTCAAAACTAACCGTGCTTGATATCCCTTTCACAGATATATATAACATTACTTCTGGCACTGATTTCCTATTCGTGGAAGGAGCATCTGCCGTTCATTCATCATCGGTGGCCAAGGTGACATTAGATGACAATAAATCGAAAGTAGCGTACTTCAATATTATTTGGTCCTCTTCACCAGATAGTTTAAAATATAGTCCGTACATCAGTAAGCCCGAGTTGATTGAATTCCCAACTGAAGTTCCTGGGAAAAATGCTTATGCATACTTTTATCCACCATCTAATCCTGAATACCGAGCCGTTGAAGGAGAAAAGCCTCCATTGCTATTGAAGAGCCATGGAGGACCAACGACTGAAACACACGGAGTTTTAAATTTGAGCATTCAGTACTGGACTAGTCGGGGTTGGGCGTTCGTGGATGTTAATTACGGTGGAAGCACTGGTTATGGAAGAGAGTACAGGGACCGGCTTTTAGGACGCTGGGGAATAGTGGATGTCGATGACTGTTGTAGTTGTGCTACATATTTGGCGGACAACGGAAAAGTTGACAGGGAGCGGCTGTGTATAACAGGGGGCTCTGCCGGTGGATATACTACCTTAGCCGCACTTGCTTTTAAAGATACTTTTAAGGCCGGAGCATCTTTGTATGGTGTAGCTGACTTGAAGACATTGGTAGAAGAAACTCATAAATTTGAATCTCACTACATCAATAATCTAGTTGGAGTTGATGAGAAGGTGTGGTTCGATAGATCCCCAATCAATCACGTTGATAAATTTTCTTGTCCGATTATTTTATTTCAAGGATTGGAAGACAAGGTTGTGCCGCCAAGTCAAGCTCACTTAATTTACGAGGCTTTGAAGAAAAAAGGTGTGCCGGTTGTGCTTGTTGAGTATGAAGGAGAACAACATGGTTTCCGAAAGGCTGAGAACATTAAGTATACACTCGAACAACAAATGGTTTTCTTCGCGCGAGTGATTGGAGGCTTCAATGTTGCTGATAACATCATTCCCGTCAAAATTGACAACTTCGACTGA	2214	0.4345	MTRLASVTLLNLTRFPSSSYHYSKRFFTHTRKLNHFNTPKFSLSSKTLFQRRRLRYFNTSAKVTMASDTITAPYGSWKSPITADVVSGASKSLGGTAVDGSGRLVWLESRPTESGRAVLVLEPQYPGGEAVDITPKEFGVRTLAQEYGGGAFTVSGDVVFFANYKDQRLYKQSISSLADVSPIPLTPDYGVPTVSYADGVLDTRFNRFIAVREDRRESSQNPPTTIVSIALGNKDVQEPEVLVGGSDFYAFPRLDHKSERIAWIQWSHPNMPWDKSELWVGYISENGEIYKSVCVAGYDPSVVESPIEPKWSSDGELFFITDRESGFWNLHKWIESENKVVPVYSLDAEFARPLWIFGMNSYEFVQSPKQKKLIACSYRQKGKSYLGIIDDVPGSKLTVLDIPFTDIYNITSGTDFLFVEGASAVHSSSVAKVTLDDNKSKVAYFNIIWSSSPDSLKYSPYISKPELIEFPTEVPGKNAYAYFYPPSNPEYRAVEGEKPPLLLKSHGGPTTETHGVLNLSIQYWTSRGWAFVDVNYGGSTGYGREYRDRLLGRWGIVDVDDCCSCATYLADNGKVDRERLCITGGSAGGYTTLAALAFKDTFKAGASLYGVADLKTLVEETHKFESHYINNLVGVDEKVWFDRSPINHVDKFSCPIILFQGLEDKVVPPSQAHLIYEALKKKGVPVVLVEYEGEQHGFRKAENIKYTLEQQMVFFARVIGGFNVADNIIPVKIDNFD	737

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa2g00920	737	Pfam	Prolyl oligopeptidase family	520	720	IPR001375	GO:0006508\|GO:0008236
	Vifa2g00920	737	Gene3D	alpha/beta hydrolase	458	724	IPR029058	-
	Vifa2g00920	737	PANTHER	PEPTIDASE S9 PROLYL OLIGOPEPTIDASE	65	732	-	-
	Vifa2g00920	737	SUPERFAMILY	Tricorn protease domain 2	146	418	-	-
	Vifa2g00920	737	SUPERFAMILY	alpha/beta-Hydrolases	465	719	IPR029058	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa2g00920	Vifa-Chr2	243310522	243315805	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa2g00920	10	737	Carbohydrate Esterase	AT5G36210	69.273	0.0	1009

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa2g00920	-		-	tpra:123917153	1262.67

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