Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00873 ATGGTTGGTTTAGCTCCCAAGGCCAAGGTACTAAGATATGGTAAATGGGGTGAGCAAGATGCTGCAATTCTAGTACCAGGGGACATAATCAGCATCAAGTTAGGAGACATCCTTCTGACCGATGCACGTCTTCTCGAGGGAGATCCTTTAAGTGTTGATCAATCTACTTTAACAGGAGAATCTCTTCCTATCACAAAGGGTGCAACTCAAGAAGTGTTTTCAGGATCGACCGTTAAGAAGGGTGAGATCAAAGTCACTGTGTATGCAACTGGTGTACACATGTTTTTCGGTAAAGTGACTCATTTGGTTGATAGTACTAATCAGGTTGGGCCTCTTCAGAAAGTGCTTACCGCTATTGGAAACTTTTGTATTTGTTCGATTGCGGTTGGAATAGTCATTGAACTAATTGTGATGTATCTGGCAACATCGCAAGTATAG 438 0.4224 MVGLAPKAKVLRYGKWGEQDAAILVPGDIISIKLGDILLTDARLLEGDPLSVDQSTLTGESLPITKGATQEVFSGSTVKKGEIKVTVYATGVHMFFGKVTHLVDSTNQVGPLQKVLTAIGNFCICSIAVGIVIELIVMYLATSQV 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00873 145 SUPERFAMILY Calcium ATPase, transduction domain A 6 103 IPR008250 -
Vifa2g00873 145 Gene3D - 6 90 - -
Vifa2g00873 145 Gene3D - 4 143 - -
Vifa2g00873 145 Pfam E1-E2 ATPase 5 140 - -
Vifa2g00873 145 PANTHER CALCIUM-TRANSPORTING ATPASE 3 139 - -
Vifa2g00873 145 FunFam Plasma membrane ATPase 6 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00873 Vifa-Chr2 230383167 230383604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00873 6 139 Primary Pumps ATPases AT4G30190 79.104 3.77e-68 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00873 K01535 - gmx:100794372 226.483