Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00867 ATGGAGTTCCCAACACATTCTTATCTATTTTCAACTGCGTTTCTCCGTTTCACAATATTTTTAGTTGTTTTGTTGAAAACAAAAGCGGTTTTGAAACTGCCGCCAAATGTTTCGATTCCTGCCGTGTTTGTGTTTGGAGATTCAATCATGGATACTGGAAATAACAACAACATGACAACACCTTCTCGCTGCAATTACCCTCCCTATGGCAAAGATTTTCAAGGAGGACTTCCAACAGGAAGATTTAGTAACGGAAAAGTTCCCTCGGATATTATAGTTGAAGAATTAGGAATTAAAGAGTATCTGCCAGCATATTTGGACCCAAATCTGCAGCCTAGTGAACTACTCACAGGTGTAAACTTTGCATCTGGTGGTGCAGGATATGATCCTATGACTTCACAATTAGAGGTAGCTATATCTATGTCTGGACAACTAGACTTATTCAAAGATTACATTGTGAAACTTAAAGGACTTGTTGGTGAAGATAGAACAAACTTAAAGGACTCATACAAATGTACATATACATAG 528 0.3769 MEFPTHSYLFSTAFLRFTIFLVVLLKTKAVLKLPPNVSIPAVFVFGDSIMDTGNNNNMTTPSRCNYPPYGKDFQGGLPTGRFSNGKVPSDIIVEELGIKEYLPAYLDPNLQPSELLTGVNFASGGAGYDPMTSQLEVAISMSGQLDLFKDYIVKLKGLVGEDRTNLKDSYKCTYT 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00867 175 PANTHER GDSL ESTERASE/LIPASE EXL3 21 165 - -
Vifa2g00867 175 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 42 53 IPR008265 GO:0006629|GO:0016298
Vifa2g00867 175 Gene3D SGNH hydrolase 32 169 IPR036514 -
Vifa2g00867 175 Pfam GDSL-like Lipase/Acylhydrolase 42 152 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00867 Vifa-Chr2 228527407 228528359 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00867 15 165 Pollen Coat Proteome AT1G75910 49.007 1.13e-36 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00867 - - gmx:100776769 238.424