Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00866 ATGGTAACCATAAAAGCTTCTTACGGTGTCACTCCAAATGAATCAACTCCAAATGGTTCTTTATGGCTCTCTGATTTAGATCAAGTTGTGCGTCTAAGCCACACACCACTTATTTTCATTTACAAACCAAAACAGATTCCAGAAAATGTCATTGAAACCTTAAAAAACTCTCTCAGCAAGATTCTTGTTCACTACTATCCTATAGCGGGTCGATATTGTTATGCAAAAGGCGGTCGAGTTGAATTGAATCTCAATGCAAAAGGAGCTGTTTTGACAGAAGCTGAAACCACAAAAACAGTTCATGAATATGGTGACTTTTCACCTTCTGACTCTACAAAGGAGCTTATTCCAAAAATCGATTATGGTCAACCCATCGAGGAAATTCCATTGCTTGTTGTTCAAGTTACAAGATTCTCAAACAAAGATGAAAGCTTTGTATTTGCTATTGGAGTTGCTTACTCTCACCCTTTATCTGATGGTGTTGGTTTTTCAAACTTCTTGAATTCATGGGCCAAAATAGCAAGAGGTGAAACATTAAATTCTAATGAAATACCCTTTTTAGATAGAAAACTTCTCGAATTCTCACACACTCCTTTAGAACTGCTTTTCGAACACGAAGAGTTGAAGCCACCACCACTCATTCTAGGAAGATCTGACACCAATATTGAAAGAAAGAAGAAAACAACAGCTGAGTTGTTGAAACTCACGGTAGAAGAAGTTGAAAAGTTGAAGAAAAAGGCTAATGAATTTGGTATTCCAAAAGGGTCAAGGCCTTATAGTAGCTTTGAAGCAATTAGTGCACATATATGGAAAAGTGCATCTAAGGCGCGTGATCTCGAAGAGAATCAACAAAGTGTTGTTAGATTCAATGTTGAAATTAGAAATAGAATAAGTCCAAATCTTCCTAAGAATTATTATGGGAATGCTTTGATTCAAACTTCAGCAAAAGGGTATATTGGAGATATCACATCAAAGCCTTTGAGTTATGTTGCAATGAAGATAAGAGAAGCAAATGAGTTGATAACAAATGAGTATATAAGATCACAGATTGATGTTATTAGAGGTTTTGAGCATTTGGATGATGCAAGGAAATTGTTTATAGGTGGAGAAGGTAAGAATGCAACATATTATGGGAATCCTAATCTTCGTATAACAAGTTGGTTGAATTTTCCTGCATATAAAGTTGATTTTGGGTGGGGAAAACCATTTTGCTTTGGAATTGGACATGTCTCTCCACATGATAGGGGATTGATTCTATTGAGTCCTGATGGAGATGGTTCTGTTATTGTGTGTATGCATTTTCAGGTTGATTTGATGGAGCTTTTCAAGAAGCTTTTCTTTGAGGATTTATATGGATTGTTCACATCAGCAAGATTGTGA 1380 0.3609 MVTIKASYGVTPNESTPNGSLWLSDLDQVVRLSHTPLIFIYKPKQIPENVIETLKNSLSKILVHYYPIAGRYCYAKGGRVELNLNAKGAVLTEAETTKTVHEYGDFSPSDSTKELIPKIDYGQPIEEIPLLVVQVTRFSNKDESFVFAIGVAYSHPLSDGVGFSNFLNSWAKIARGETLNSNEIPFLDRKLLEFSHTPLELLFEHEELKPPPLILGRSDTNIERKKKTTAELLKLTVEEVEKLKKKANEFGIPKGSRPYSSFEAISAHIWKSASKARDLEENQQSVVRFNVEIRNRISPNLPKNYYGNALIQTSAKGYIGDITSKPLSYVAMKIREANELITNEYIRSQIDVIRGFEHLDDARKLFIGGEGKNATYYGNPNLRITSWLNFPAYKVDFGWGKPFCFGIGHVSPHDRGLILLSPDGDGSVIVCMHFQVDLMELFKKLFFEDLYGLFTSARL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00866 459 Pfam Transferase family 1 445 - -
Vifa2g00866 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 445 - -
Vifa2g00866 459 Gene3D - 1 210 IPR023213 -
Vifa2g00866 459 Gene3D - 217 449 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00866 Vifa-Chr2 228297072 228298451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00866 2 448 Monolignol Biosynthesis Gene Families AT5G48930 34.967 1.26e-87 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00866 K13065 - gmx:100778626 520.005