Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00836 ATGGGGTTTGGTACGATTTGGAGAAGATGGATGGAGCTTTTAGCTTTACAAAGTAAGATGTCTGTGTTAGTTAACGTTAGTCCGACGAAGGAGTTTCAAGTTGAGAAAGGGTTAAGGCAAGGCGATCCTCTTTCGCCTTTTCTTTTTGTTATGGTAGCGGAAGGTTTGACGGGAGCGATGAGGTTGGACCTGAGCCTTCACACGGTGTTTTTATCCCTCCAAGATAGGTTGTTGGCGCACAGTTTGGAGTCGGCTGAGAAGGATAAAGTGGTTTGGACTAAGGCTCTGGATGGTGAGTTTTCGGTATCTTCTTACTATGAATATTATACTAATTTTCGAATTCCTTTCGGTCCTCTTAATAGGTTTGATGAAGTTTTGGGTATGGAAATTGAGCTGCAAAACCATAACAACTACCTACGAGCAAAGATAGCTGAACATGAAAGAGCTCAACAACAGCAACAAAACTTGATGCCAGAAACAATGTGTGATCAGTCTTTACCTTCACAGACCTATGACAGAAACTTCTTTCCCGTAAATCTTCTTGGATCAGATCAGCATGAGTATTCCCGTCAAGACCAAACTGCTCTTCAGCTTGTGTGA 600 0.4233 MGFGTIWRRWMELLALQSKMSVLVNVSPTKEFQVEKGLRQGDPLSPFLFVMVAEGLTGAMRLDLSLHTVFLSLQDRLLAHSLESAEKDKVVWTKALDGEFSVSSYYEYYTNFRIPFGPLNRFDEVLGMEIELQNHNNYLRAKIAEHERAQQQQQNLMPETMCDQSLPSQTYDRNFFPVNLLGSDQHEYSRQDQTALQLV 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00836 199 PANTHER REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED 6 57 - -
Vifa2g00836 199 Coils Coil 132 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00836 Vifa-Chr2 219038352 219041040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00836 129 199 MADS-box Gene Family AT3G58780 47.436 1.85e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00836 - K09264 gmx:100808734 112.849