Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00808 ATGAGTTTCTCTATTCTCCACCTTATCTCTTTCATTCTTCTTTGGCCTTTCTTGCAACAATCTTCTCATGCCATCAAAAAGTCATATATTGTCTACTTAGGATCACATTCTCATGGGCCAAATCCTTCAGCAAGTGATCTTCAATTTGCAACAAATTCACATTACAATTTACTTGGCTCACACCTGGGAAGCCATGAGAAAGCTAAGGAAGCAATGTTTTACTCATATAATAAACACATCAATGCTTTTGCTGCTGTACTTGAAGTAGATGAAGCAACCAAAATTGCAAGACATCCAAATGTAGTGTCTGTGTTTGAGAACAAAGGGCATGAATTGCAAACCACAAGATCATGGGAATTTCTTCTTGGGCTAGAGAATAATTATGGAGTGGTTCCCAAAGATTCCATATGGGATAAGGCAAGATATGGTGAAGGTACAATCATTGCAAACATTGATACAGGTGTTTGGCCTGAATCTCAAAGCTTTAGTGATGATGGAATGGGCCCGGTCCCATCAAGGTGGCGTGGAATCTGCCAACTTGACAATTTTCACTGCAATAGGAAATTGATAGGAGCAAGGTTCTACAGCAAAGGTTACGAATCAAAATTCGGAAGACTAAACCAATCCCTTTATACATCACGAGACGTATTAGGACATGGAACACCAACATTATCAATTGCAGGAGGAAACTTTGTTTCAGATGCTAATGTTTTTGGCTTCGCCAACGGTACTGCTAAAGGTGGATCACCAAGATCTCATGTTGCAGCCTACAAAGTGTGTTGGCTTGGAACAGTTGAGATTGAATGCACTGATGCAGATATCATGAAAGCTTTTGAGGATGCTATAAGTGATGGTGTTGATGTGATTTCATGTTCTTTAGGTAAAGGTAGTCCTACAGAATATTTTGAAGATGGAATTTCTATAGGGGCTTTTCATGCAGTTGAGAATGGTGTAATAGTTGTTGCTGGTGGAGGTAATTCAGGACCAAAATTTGGAACTGTTACTAATTTGGCACCTTCGTTGTTTAGTGTTGCTGCTAGCACAATAGATAGAAACTTTGTTAATCATCTTCAACTTAGTGACAAGAAGCATATAATAATGGGAACTAGTCTTTCAACGGGTTTGCCATATGAGAAGTTCTACTCCTTGATCAGTTCTGTAGATGCTAGAGTTGCTAATGCAACAACGGAAGATGCTGAAATGTGTAAGGTTGGAAGTCTTGACCCCAACAAGGTTAAAGGAAAAATCTTGTTCTGCCTCCTAAGAGAGATAAACGGATTAGTTTATGCAGAGGAAGAAGCTGTTTCGGGTGGTGCAATAGGACTAGTTTTGGGAAATGATAAGCGGCGCGGTAATGACATTATGGCATATGCGCATTTGTTGCCAACTTCACATATCAATTACACAGATGCTGAATTTGTTCATTCCTACATCAAAGCCACCAAAAACCCCGTGGCTTACATGAGTAAGGCAAAAACTGAACTGGGAGTAAAACCAGCTCCAGTAATAGCTTCACTCTCATCAAGGGGACCTAATCCCATCCAACCGATAATCCTCAAGCCCGATATCAGTGCACCAGGTGTGGACATTCTTTATGCTTACATAGGAGCTATAAGTCCAACTGGTCTTGCATCAGATAATCGTCGGATTCCATATAATATAGGGTCCGGGACTTCTGTAGCATGCCCTCATGTTTCTTCCATTGTTGCCCTTCTCAAAACCATCTATCCCTATTGGTCTCCTGCAGCCTATAAATCTGCAATCATGACTACAGCAACAATACTCAACAACAGTGAAAGAGAAATTAAAGATCAATCTAAGGAAGATGCAACTCCATTTGGTTATGGTGCAGGACACATACAACCAGAACTTGCTATGGACCCTGGACTTATCTATGATCTAAGCATTGTTGATTACATGAACTTCCTATATTCTCATGTGCCTAATCTAAGCAAACACTCTGTACAAGTTATTACTCGTACAGTTACAAATGTAGGGTCACAAGGTACATATCAAGTGCATGTCAAGGAACCTTATGGGATTTCTGTTTTGGTTAAGCCAAAATCATTAAAATTTAATGAAGTTGGTGAAAAGAAGACATTCAAGGTTATTTTTAAGGTAACCAAACCAACATCAGGTTATGTGTTTGGTCACTTGTTGTGGTCTGATGGCAGACACAAAGTTATGAGTCCTTTAGTAGTGAAGCATAACTAA 2214 0.3966 MSFSILHLISFILLWPFLQQSSHAIKKSYIVYLGSHSHGPNPSASDLQFATNSHYNLLGSHLGSHEKAKEAMFYSYNKHINAFAAVLEVDEATKIARHPNVVSVFENKGHELQTTRSWEFLLGLENNYGVVPKDSIWDKARYGEGTIIANIDTGVWPESQSFSDDGMGPVPSRWRGICQLDNFHCNRKLIGARFYSKGYESKFGRLNQSLYTSRDVLGHGTPTLSIAGGNFVSDANVFGFANGTAKGGSPRSHVAAYKVCWLGTVEIECTDADIMKAFEDAISDGVDVISCSLGKGSPTEYFEDGISIGAFHAVENGVIVVAGGGNSGPKFGTVTNLAPSLFSVAASTIDRNFVNHLQLSDKKHIIMGTSLSTGLPYEKFYSLISSVDARVANATTEDAEMCKVGSLDPNKVKGKILFCLLREINGLVYAEEEAVSGGAIGLVLGNDKRRGNDIMAYAHLLPTSHINYTDAEFVHSYIKATKNPVAYMSKAKTELGVKPAPVIASLSSRGPNPIQPIILKPDISAPGVDILYAYIGAISPTGLASDNRRIPYNIGSGTSVACPHVSSIVALLKTIYPYWSPAAYKSAIMTTATILNNSEREIKDQSKEDATPFGYGAGHIQPELAMDPGLIYDLSIVDYMNFLYSHVPNLSKHSVQVITRTVTNVGSQGTYQVHVKEPYGISVLVKPKSLKFNEVGEKKTFKVIFKVTKPTSGYVFGHLLWSDGRHKVMSPLVVKHN 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00808 737 Pfam Peptidase inhibitor I9 28 109 IPR010259 -
Vifa2g00808 737 Gene3D - 350 495 - -
Vifa2g00808 737 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 113 IPR037045 -
Vifa2g00808 737 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 734 IPR045051 -
Vifa2g00808 737 CDD Peptidases_S8_3 110 593 IPR034197 -
Vifa2g00808 737 FunFam Subtilisin-like protease SBT5.3 17 113 - -
Vifa2g00808 737 SUPERFAMILY Subtilisin-like 128 627 IPR036852 GO:0004252|GO:0006508
Vifa2g00808 737 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Vifa2g00808 737 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Vifa2g00808 737 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Vifa2g00808 737 FunFam Subtilisin-like protease SBT1.5 145 361 - -
Vifa2g00808 737 Gene3D - 636 736 - -
Vifa2g00808 737 ProSiteProfiles Serine proteases, subtilase domain profile. 127 626 - -
Vifa2g00808 737 CDD PA_subtilisin_like 363 486 - -
Vifa2g00808 737 Gene3D Peptidase S8/S53 domain 145 635 IPR036852 GO:0004252|GO:0006508
Vifa2g00808 737 Pfam Subtilase family 143 618 IPR000209 GO:0006508|GO:0008236
Vifa2g00808 737 FunFam subtilisin-like protease SBT1.5 350 495 - -
Vifa2g00808 737 Pfam Fibronectin type-III domain 651 734 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00808 Vifa-Chr2 207658007 207661652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00808 5 735 Subtilisin-like Serine Gene Family AT2G04160 51.163 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00808 - - pcin:129318364 978.008