Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00755 ATGGCCACTCTTGTTTTCTTTCTACTACTTGTTTCCTTGTTTCCTTCTATTTCTTCACTTTCTTTGAAAAACCAAGCTTCAATCTTAGTTTCAATGAAACAAGAGTTTGAACTTTCAAACACTTCTTCATGTTTAAACACATGGAACATTTCTAACTATGTTTCACTTTGCACTTGGTATGGAATTCAATGTGACCAAACCAACAATGTTGTTTCACTTGACATATCAAACTTAAATGTTTCTGGTTCACTTTCACCTCTTATCACAAACCTTTCCACTCTTGTGAATCTTTCAATCCAAGGCAACAATTTCCATGGTGAGTTTCCAACTGAAATTCATAACCTACAAAGTTTGAAATTCCTCAACATATCAAACAATATGTTCGCTGGAAACATGAGTTGGGAATTCAATAGATTGGAAGAGCTTGAAGTTCTTGATGTTTACAACAATGGCTTCCATGGTTCACTTCCTCATGGTGTAACTCAGTTGTTGAGGCTTAAGCATTTGAATTTTGGAGGGAATTACTTTTCAGGAAAAATTCCTAAAAGTTATGGTGAAATGAAACAGCTCAATTTTTTGTCTCTTGCTGGCAATGATTTGAGTGGTTTTATACCTACTGAGCTTGCAAATTTGACAAGTTTGGAGTATCTTTATTTAGGTTATTTCAATCAATTTGATGGTGGAATTCCAAAAGAGTTTGGTAAGATGGTTAATCTGGTTCATTTAGACCTAGCAAATTGTTTCTTGAAAGGTTCAATTCCACATGAGTTAGGTAAACTTTACAAGTTAGATACACTTTTCTTGCAAACGAATCAACTAACCGGTTTGATTCCGTCTGAACTAGGTAACTTGACTAGATTGAATGCCCTTGATTTATCACTCAATAACCTAACCGGTGGAATTCCGGACGAATTCTCGAATCTTCGAGAACTTTTGCTATTGAACTTGTTTATCAACAAGTTCCACGGTGAAATTCCCGAGTTCGTCTCCGAGTTGCCTAAATTGGAAGTACTTAAGCTTTGGAGGAATAACTTCACTGGAGTTATTCCTCCGAAGCTAGGCCAGAACGGAAGGTTAACCGAGGTTGATTTGTCGACGAATAAACTCACTGGAGTATTGCCGAAATCACTTTGCCTTGGAAAGAGGTTAAAAATCTTGATCTTGCTTAACAACTTTTTGTTTGGTTCTTTGCCTAATGATCTTGGTGAATGCTACACTCTCCAAAGAGTTAGAATTGGTCAGAACTATCTGACTGGTTCAATTCCTCATGGCTTTCTTTATTTACCAAATCTTATTCTTTTGGAACTACAGAACAATTATCTCAGTGAAGTGATTCCACAAGAAAAGGGAAAAAACACAACCTCGAAGTTAGAACAGTGTAATCTATCAAACAATAGGTTATCAGGTTCTTTACCAACCTCAATTGGAAACTTTCCGAATTTGCAAACTCTTCAGCTTAGTGGAAACAGATTCTCGGGTCAAATTCCATCAGATATAGGAAAACTCATAAGTATCCTCAAATTAGATATAAGTAGCAACAACTTTTCAGGTGCTATTCCTATTGAAATAGGTAAATGTACCTTGCTAACTTACATAGATTTGAGTCAAAACCAGTTTTCGGGTCCTATTCCAATTCAACTTGCTCAAATTCGTATACTAAACCATCTTAATGTGTCATGGAATCACTTGAGCCAAACACTTCCTAAGGAACTTGGAGCCTTAAAGGGCTTAACTTCAGCTGATTTCTCGAATAATAACTTCTCCGGTTCGATACCTGAAGGAGGACAGTTCTCAACTTTTAAGTCAAAATACTTTGAAGGTAATCCTCAACTATGTGGATATGAGTTCAATCCATGCAAACTAGATGAATCGGAATCGCAACAAAGAAGCAGTTCAAGAAACGGATTTCATGGAAAGTTTAAGCTCCTTTTCGCGTTGGCGTTATTGTTGTGTTCATTGGTTTTTGCAAGTTTGGCTATCGTCAAGAGTAGAAAATCGAGCAGGGATTCGAATTCATGGAAGCTGACAGCATTTCAGAAAATGGAATACGGAAGTGAAGAAATCGTCGGTTGTATAAAGGAAAGCAATGTGATAGGAAGAGGTGGAGCTGGCGTTGTTTACAAAGGAACAATGCCGAATGGAGATGATGTAGCTGTGAAGAAACTACTAGGAATAAACAATGGTTCATCTTCTCATCAGGATAACGGTTTCTCGGCTGAAATTAAGACGTTAGGTAGAATCAGACACCGGTATATTGTTAGGTTGGTTGCTTTTTGTTCGAACAAACAAACAAACTTGCTTGTGTATGAGTATATGGAAAATGGAAGTCTTGGTGAAGTTTTGCATGGGAAGAGAGGTGAGTTTTTGAAATGGGATGTTAGGTTGAAAATTGCTGTTGAAGCTGCTAAAGGACTTTGTTATTTGCATCATGATTGTTCACCTTTGATCATTCATAGAGATGTTAAGTCGAATAATATTTTGTTGAACTCCGAATTTGAGGCTCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGCAAGATAATGGGAATTCCGAATGCATGTCTTCTATTGCTGGTTCCTATGGATATATTGCACCAGAATATGCATACACTCTGAAGGTTGATGAGAAAAGTGATGTGTATAGTTTCGGAGTGGTGCTTTTAGAGCTCATAACGGGGAAAAGGCCGGTTGGAGAATTTGAAGAAGAAGGGTTAGACATTGTTCAATGGACCAAAATAAAAACCAATTGGAACAAGGATATGGTGATGAAGATCCTTGATGAGAGGCTAGCTCAGATTCCTTTAGATGAAGCAAAACAAGTGTTTTTTGTGGCAATTTTATGTGTCCATGAACATAGTGTGGAGAGACCAACCATGAGGGAAGTGGTTCAAATGCTTGCACAAGCAAAGTAA 2913 0.3735 MATLVFFLLLVSLFPSISSLSLKNQASILVSMKQEFELSNTSSCLNTWNISNYVSLCTWYGIQCDQTNNVVSLDISNLNVSGSLSPLITNLSTLVNLSIQGNNFHGEFPTEIHNLQSLKFLNISNNMFAGNMSWEFNRLEELEVLDVYNNGFHGSLPHGVTQLLRLKHLNFGGNYFSGKIPKSYGEMKQLNFLSLAGNDLSGFIPTELANLTSLEYLYLGYFNQFDGGIPKEFGKMVNLVHLDLANCFLKGSIPHELGKLYKLDTLFLQTNQLTGLIPSELGNLTRLNALDLSLNNLTGGIPDEFSNLRELLLLNLFINKFHGEIPEFVSELPKLEVLKLWRNNFTGVIPPKLGQNGRLTEVDLSTNKLTGVLPKSLCLGKRLKILILLNNFLFGSLPNDLGECYTLQRVRIGQNYLTGSIPHGFLYLPNLILLELQNNYLSEVIPQEKGKNTTSKLEQCNLSNNRLSGSLPTSIGNFPNLQTLQLSGNRFSGQIPSDIGKLISILKLDISSNNFSGAIPIEIGKCTLLTYIDLSQNQFSGPIPIQLAQIRILNHLNVSWNHLSQTLPKELGALKGLTSADFSNNNFSGSIPEGGQFSTFKSKYFEGNPQLCGYEFNPCKLDESESQQRSSSRNGFHGKFKLLFALALLLCSLVFASLAIVKSRKSSRDSNSWKLTAFQKMEYGSEEIVGCIKESNVIGRGGAGVVYKGTMPNGDDVAVKKLLGINNGSSSHQDNGFSAEIKTLGRIRHRYIVRLVAFCSNKQTNLLVYEYMENGSLGEVLHGKRGEFLKWDVRLKIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFLQDNGNSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGKRPVGEFEEEGLDIVQWTKIKTNWNKDMVMKILDERLAQIPLDEAKQVFFVAILCVHEHSVERPTMREVVQMLAQAK 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00755 970 Gene3D Ribonuclease Inhibitor 265 346 IPR032675 -
Vifa2g00755 970 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 224 329 - -
Vifa2g00755 970 SUPERFAMILY RNI-like 72 394 - -
Vifa2g00755 970 SUPERFAMILY Protein kinase-like (PK-like) 683 966 IPR011009 -
Vifa2g00755 970 ProSiteProfiles Protein kinase domain profile. 692 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa2g00755 970 SMART serkin_6 692 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa2g00755 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672|GO:0006468
Vifa2g00755 970 Pfam Protein tyrosine and serine/threonine kinase 694 966 IPR001245 GO:0004672|GO:0006468
Vifa2g00755 970 Gene3D Ribonuclease Inhibitor 22 184 IPR032675 -
Vifa2g00755 970 SMART LRR_typ_2 139 163 IPR003591 -
Vifa2g00755 970 SMART LRR_typ_2 550 574 IPR003591 -
Vifa2g00755 970 SMART LRR_typ_2 428 452 IPR003591 -
Vifa2g00755 970 SMART LRR_typ_2 260 283 IPR003591 -
Vifa2g00755 970 SMART LRR_typ_2 332 356 IPR003591 -
Vifa2g00755 970 SMART LRR_typ_2 478 502 IPR003591 -
Vifa2g00755 970 SMART LRR_typ_2 284 307 IPR003591 -
Vifa2g00755 970 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 382 968 - -
Vifa2g00755 970 Gene3D Transferase(Phosphotransferase) domain 1 772 970 - -
Vifa2g00755 970 Pfam Leucine rich repeat N-terminal domain 23 65 IPR013210 -
Vifa2g00755 970 FunFam Leucine-rich repeat receptor-like protein kinase 22 182 - -
Vifa2g00755 970 Gene3D Ribonuclease Inhibitor 186 262 IPR032675 -
Vifa2g00755 970 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 661 771 - -
Vifa2g00755 970 Pfam Leucine Rich Repeat 238 260 IPR001611 GO:0005515
Vifa2g00755 970 Gene3D Ribonuclease Inhibitor 347 623 IPR032675 -
Vifa2g00755 970 SUPERFAMILY L domain-like 356 618 - -
Vifa2g00755 970 Gene3D Phosphorylase Kinase; domain 1 660 771 - -
Vifa2g00755 970 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 772 970 - -
Vifa2g00755 970 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 336 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00755 Vifa-Chr2 188705995 188709705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00755 40 968 Receptor kinase-like Gene Family AT5G65700 57.556 0.0 1070
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vifa2g00755 PK_Tyr_Ser-Thr 7.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00755 - - gmx:100803075 1432.16