Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00752 ATGAGAACCTTAAGAAGCTTCGATGTCTTCCCTTTAAATTTGAGCAACTTCTATGGTGGCTGCGCTATTCTTCTTCTTCTTCTTCTTCTTGTTGTTACTTTATTGTTTCTTCTGAACCGTAAGAGCAGATCCCTGTTGGCGTCCTCTTTGATCTCCGATTCTAGCAATTTAAACCCAAGAACCTCAAACACTGTCACTGATGCTGATTTGAAGTTTTTAATGGATGAAATTCTAAATCAGAACCATAAATGGGAGGATGTCATAGATAAAACAAATCATCATCTATGCTACAAAGCTAAATCCACCAAACCTAAGAATGGTCCCCTGAAATATTGGAGTATGACTGTGTTCAATGATATTTCCGCCGAGATGCTAAGAAACTTCTACATGGACAATCACTACAGAAAGCAATGGGATAACACTGTGGTCGAACACAATCAGCTGCAGCTGGATAAATCTGATGGTTCTGAAGTTGGTCGTACAGGTCAGACTCCATTGTTTCCTCGTATTTTTGGTCATGAAGCTGGAGGGATCGTGGAGAGCGTAGGTGAAGGTGTGACTCATCTGAAACCAGGGGATAAAGCCCTGCCTGTATTCACAGGGGAGTGTGGTGAATGTCCACATTGTAAGTCAGAGGAGAGCAACATGTGTGATCTTCTTAGGATCAACACTGACAGAGGTGTCATGCTCAATGATAACAAGTCTAGATTCTCTATCAATGGAGAGCCCATAAACCATTTCGTGGGCACCTCTACATTCAGTGAGTACACAGTGGTTCATGCTGGATGTGTTGCAAAGATCAATCCTGAAGCACCACTTGACAAAGTTTGTATTCTCAGTTGTGGAATATGCACAGGTCTTGGTGCTACTGTGAATGTTGCAAAACCAAAGCCAGGTTCTTCAGTTGCTATCTTTGGGCTTGGAGTTGTTGGCCTTGCTGCTGCTGAAGGTGCAAGGATCTCTGGTGCATCAAGAATCATTGGAGTTGATTTAGTTTCCAGCCGATTTGAATTAGCTAAGAAGTTTGGAGTGAATGAGTTCGTGAACCCGGAAGTAGATTAA 1062 0.4237 MRTLRSFDVFPLNLSNFYGGCAILLLLLLLVVTLLFLLNRKSRSLLASSLISDSSNLNPRTSNTVTDADLKFLMDEILNQNHKWEDVIDKTNHHLCYKAKSTKPKNGPLKYWSMTVFNDISAEMLRNFYMDNHYRKQWDNTVVEHNQLQLDKSDGSEVGRTGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDKALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMLNDNKSRFSINGEPINHFVGTSTFSEYTVVHAGCVAKINPEAPLDKVCILSCGICTGLGATVNVAKPKPGSSVAIFGLGVVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPEVD 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00752 353 ProSiteProfiles START domain profile. 73 158 IPR002913 GO:0008289
Vifa2g00752 353 Pfam Alcohol dehydrogenase GroES-like domain 164 266 IPR013154 -
Vifa2g00752 353 FunFam alcohol dehydrogenase 1-like isoform X1 139 285 - -
Vifa2g00752 353 SUPERFAMILY GroES-like 163 290 IPR011032 -
Vifa2g00752 353 PANTHER ALCOHOL DEHYDROGENASE 155 351 - -
Vifa2g00752 353 SUPERFAMILY Bet v1-like 67 154 - -
Vifa2g00752 353 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 272 350 IPR036291 -
Vifa2g00752 353 FunFam S-(hydroxymethyl)glutathione dehydrogenase 286 353 - -
Vifa2g00752 353 Gene3D - 286 351 - -
Vifa2g00752 353 Gene3D - 156 285 - -
Vifa2g00752 353 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 172 186 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00752 Vifa-Chr2 188330608 188332352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00752 167 348 Monolignol Biosynthesis Gene Families AT1G72680 27.322 1.32e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00752 K18857 - gmx:100801918 356.295