Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00751 ATGTTTCAGATTCACTCATGCTCTTTGATTGCAACAATAATAATTGTTGTTACAACACAAATCATTGTAGGAGTAAATTCCTTTTCAGAATCTGATAAGATAAGCAGTTTACCTCAGCAGCCAAAAGTGGAATTCCAGCAATATGCTGGTTACATTACAGTTGATGATGTGCAGAAAAGATCTTTGTTTTACTACTTTGTTGAAGCAGAAGTTGAACCGGCTTCTAAACCAGTTGTGCTTTGGTTAAACGGAGGGCCTGGTTGTTCATCTGTTGGAGCTGGAGCTTTTGTGGAGCATGGACCATTCAAACCATCTAAAAATGGTCTTATTAAAAATGATTACAGTTGGAACAAAGAAGCAAATATGTTGTACTTGGAATCACCTGCTGGTGTTGGTTTCTCCTATTCTGCCAATGAATCATTCTATGACTTTGTCAATGATGAAATGACAGCAAAAGATAACCTCGTTTTTCTACAACATTGGTTCACTGAATTTCAAGAGTACAAAAATAATGATTTTTTTATCACTGGGGAGAGCTATGCAGGTCACTATGCACCTCAACTTGCACAACTCATTCTCCAAACGAAAAGCAAAATCAATCTCAAGGGAATAGCAATAGGGAATCCTCTTCTTGATTTTAACACAGATTTCAATTCAAGAGCTGAGTTTATCTGGTCTCATGGACTGATATCAGATTCAACCTATGAAACCTTTACGAAAATATGCAACTTTTCCCAAATTAGAAGACAATATCAAAATGGAGCACTTACTCCCATTTGTGCAAGAGTGAATAGGCTAGTCTCTATGGAGACTAGTAGATATATTGACTCGTACGATGTTACTCTAGATATATGTCTGCGATCAGAAAAACAACAGGCATATAGGCTGACTCAACTGCAAGAGGGAGATAAGATAGATGTTTGCGTGGAAGATGAATCATTCACATACTTGAACAGAAAAGAAGTTCAAGAAGCTCTCCATGCTAAGCTTGTAGGAATCATCACCACATGGTTTACTTGTAGTGAAGTTCTCAAATATGACATGCAAAACCTAGAGATTCCAACTATATCGATTCTAGGGACACTCGTTAAATCAGGTGTAAGAGTTCTAGTATACAGCGGAGATCAAGATTCAGTTATACCTTTAACCGGGACTCGTTCTTTGGTAAATGGATTAGCCAAGGACATTGGGTTGAACACAACAGAGTCCTATAGAGCTTGGTTGCAGGGAAGACAGGTAGGTGGATGGACACAAGTATATGGTAGTAACATTTTATCATTTGCTACCATAAGAGGAGCAGCTCATGAGGCTCCATTTTCACAACCAGAGAGATCATTGGTGTTGTTTAAGGCATTTTTGGAAGGAAAACCACTTCCAACTATTGTCTGA 1389 0.3816 MFQIHSCSLIATIIIVVTTQIIVGVNSFSESDKISSLPQQPKVEFQQYAGYITVDDVQKRSLFYYFVEAEVEPASKPVVLWLNGGPGCSSVGAGAFVEHGPFKPSKNGLIKNDYSWNKEANMLYLESPAGVGFSYSANESFYDFVNDEMTAKDNLVFLQHWFTEFQEYKNNDFFITGESYAGHYAPQLAQLILQTKSKINLKGIAIGNPLLDFNTDFNSRAEFIWSHGLISDSTYETFTKICNFSQIRRQYQNGALTPICARVNRLVSMETSRYIDSYDVTLDICLRSEKQQAYRLTQLQEGDKIDVCVEDESFTYLNRKEVQEALHAKLVGIITTWFTCSEVLKYDMQNLEIPTISILGTLVKSGVRVLVYSGDQDSVIPLTGTRSLVNGLAKDIGLNTTESYRAWLQGRQVGGWTQVYGSNILSFATIRGAAHEAPFSQPERSLVLFKAFLEGKPLPTIV 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00751 462 Gene3D - 356 455 - -
Vifa2g00751 462 Pfam Serine carboxypeptidase 41 455 IPR001563 GO:0004185|GO:0006508
Vifa2g00751 462 FunFam Carboxypeptidase 27 459 - -
Vifa2g00751 462 SUPERFAMILY alpha/beta-Hydrolases 39 459 IPR029058 -
Vifa2g00751 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 442 IPR001563 GO:0004185|GO:0006508
Vifa2g00751 462 Gene3D alpha/beta hydrolase 28 286 IPR029058 -
Vifa2g00751 462 Gene3D - 308 344 - -
Vifa2g00751 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Vifa2g00751 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Vifa2g00751 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Vifa2g00751 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Vifa2g00751 462 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Vifa2g00751 462 FunFam Carboxypeptidase 355 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00751 Vifa-Chr2 187931488 187934125 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00751 316 458 Calmodulin-binding Proteins AT2G22960 30.769 1.72e-16 75.9