Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00748 ATGGTGAAGCAACAAGAAAGGAGGATCGTGCAGCAAAGGGATGCATGTGAATATGCACATGGTGTTTTTGAATGCTGGCTTCATCCTGCTCATTACAGGACAAAGTTTTGCAATGATAAGGTTGGATGCACCAGAAAAGTTTGTTTCTTTGCTCACAATCCTGAGGAGCTTCGCCCGGTGTATGCTTCTACTGGCTCAGGTTTACCTTTACCCACATCATATTCATCTAGTACTTTTCCAATTTACCCTTTCACAGTGAATGCTTTACAATCTGCATGGAAGCCACCTTTGACTCCATCTGTAGCATCATCGCATGCTGCTGGAACTGAGTGGCAGATTCATGCTGCAGTCCCTACCTTTCAGATGCTCCAACTTGAATATCTCTTTATGTGGAAGCTAATGATTGACGAGATGGCAAGTCTCGCAGGAGTGAATCATACCAACTTTGAAGGCATTTTCAGGTCGCAGATACCATCTCTAACATCAATGCAGGTGCATCAGAATAGGGGCTATCCTGCTGATCTTATCAATTCAAATGTGGTTCGATCACCACAAATTAGGGTTGATCCATCTGTGTATCCAAGATATGATGCCTTTTCGAAGCGGAGTCATTCTGAGCGTCCTTCTACTTCTTCAGCTGCTATGGAGCCTTCTACCACCTTCCCTGGTTGGGGCTCTCCAGGTAGAAAATTAGACTGGACCATCAGCAACAAGGAGCTGAATAAGATGAGAAAATCTTATTCTTCCGGTTTTCAAAACTGA 762 0.4396 MVKQQERRIVQQRDACEYAHGVFECWLHPAHYRTKFCNDKVGCTRKVCFFAHNPEELRPVYASTGSGLPLPTSYSSSTFPIYPFTVNALQSAWKPPLTPSVASSHAAGTEWQIHAAVPTFQMLQLEYLFMWKLMIDEMASLAGVNHTNFEGIFRSQIPSLTSMQVHQNRGYPADLINSNVVRSPQIRVDPSVYPRYDAFSKRSHSERPSTSSAAMEPSTTFPGWGSPGRKLDWTISNKELNKMRKSYSSGFQN 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00748 253 MobiDBLite consensus disorder prediction 205 219 - -
Vifa2g00748 253 PANTHER UNKEMPT FAMILY MEMBER 11 252 IPR045234 -
Vifa2g00748 253 MobiDBLite consensus disorder prediction 199 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00748 Vifa-Chr2 187274555 187275510 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00748 11 248 C2H2 Transcription Factor Family AT5G12850 29.538 1.43e-33 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00748 - - psat:127084564 266.544