Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00747 ATGTGGGTGTTTTACCTGATCTCGCTTCCTCTTACAACGGGAATGGTACTTTTCATGTTGAGGTACTTTGCTGGTCCAGATGTCCCTCAGGATATGGTCGAACGTAGGGATGATGTTGTTGCTCGTCTCAAGTCTCTTGAAGATGTCGCCGCTCCTCTGGTTGCTTTCCTTCAGAATCCTGCTGCTGTTCAGGAGTTGAGGGCTGATAAATACTACAATCTCCAGATGCTCAATGACAAATACCAGATTGGTGCTGCACAAATAGAGGCATTATACCAATATGCCAAGTTTCAGTTTGAATGTGGAAACTACTCTGGTGCTGCTGACTATCTTTATCAGTACAGAGCATTATGCACAAATAGTGAAAGGAGTTTGAATGCATTGTGGGGAAAGCTGGCAGCTGAAGTATTGATGCAAAATTGGGATATTGCTCTTGAAGAGCTCAACCGCCTGAAGGAAATAATTGACTCAAAGAATTTTTCATCACCTATTAATCAGGTGCAAAGCAGAATATGGTTGATGCATTGGAGTCTGTTCATCTTTTTGAACCATGAAAATGGAAGAACACAAATCATTGATTTGTTTAACCAGGACAAGTATCTTAACGCAATCCAAACTAGTGCTCCACACCTTTTGCGATACTTGGCCACAGCATTTATTGTCAACAAAACTTCTGAAGGAAACCTGCCTGATAATGATGCAACAGTCTCTGTTAAACCAGATAATCGTGACTCTACTCCACAAGAATCTCCTACTCTAGTGGCTAGTGCATTAGAGAAAACAATCGATTTTGCAGCTTCAAATGAAACTGATAACATTGCTGGTAATTTGAATAACACTGCGACCTCTGGTACCACCGAAAGTGACAAGTCCAAAGGTATCACCGAAACTAGTGAAGCAAAAGAAACTAAGAACATCTACACCACTGTGGATGAGAGGTTCAAGGGCAATACTCAAACAGGCAAAACTGATGAAAAATCAGACTCTTCCTCAATCACCTTACGCTACGGATCCAGCATGGTAACACCAACTAACATTTCCATTCAACTACTAACTTCTTCACATAGCATATTACCTCTTAATAACAAAATTGCCTTCAACAAACTTAGCTAA 1113 0.407 MWVFYLISLPLTTGMVLFMLRYFAGPDVPQDMVERRDDVVARLKSLEDVAAPLVAFLQNPAAVQELRADKYYNLQMLNDKYQIGAAQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERSLNALWGKLAAEVLMQNWDIALEELNRLKEIIDSKNFSSPINQVQSRIWLMHWSLFIFLNHENGRTQIIDLFNQDKYLNAIQTSAPHLLRYLATAFIVNKTSEGNLPDNDATVSVKPDNRDSTPQESPTLVASALEKTIDFAASNETDNIAGNLNNTATSGTTESDKSKGITETSEAKETKNIYTTVDERFKGNTQTGKTDEKSDSSSITLRYGSSMVTPTNISIQLLTSSHSILPLNNKIAFNKLS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00747 370 SMART eIF3_N_2 10 98 IPR019010 -
Vifa2g00747 370 MobiDBLite consensus disorder prediction 230 251 - -
Vifa2g00747 370 MobiDBLite consensus disorder prediction 271 299 - -
Vifa2g00747 370 MobiDBLite consensus disorder prediction 271 291 - -
Vifa2g00747 370 Pfam eIF3 subunit 6 N terminal domain 26 98 IPR019010 -
Vifa2g00747 370 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 26 230 IPR016650 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00747 Vifa-Chr2 186946782 186947894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00747 27 231 Eukaryotic Initiation Factors Gene Family AT3G57290 82.927 4.42e-125 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00747 K03250 - gmx:100788418 370.548