Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00731 ATGGCTTCCACCCAATCCGCCTTCGCGGGAACCATTCCGGCTCCGAAGGTTAGGGTAGTTGCAAAAATTCGTGGGTTTTCGGATCCAGATACCAGTTTCGAACCCTCCAGAACTGTCGACTGGGTTTCGGTGAGCACAGAAATTTCCGGGGAAGTTACCATCTCCTTTAAAGAACAATCTTCTAGCCGAGATTTAGGGTTTCTGAAGTATGCAGTTTTTGTATTGTTTGTTATAAGTCGGTATTCAGTTGACTATTGCTACAACGAACATGAAGATAATGAGGTAATCTATTTAAATTTGTATTTGCTGGCTCCTCCAAATCTGCTGATACCCTTTTCAAGCTCAACTGTAGTTGCATATATAGCTCCTCAGCAAGTGCCAGTTCAATATGGAGGACTTAGCAGAGAGGGTGAACAGGAATTCACCACTGCTGACCCTGCTACAGAGGTTATTATCAAACCAGCAACAAAACATGCTGTTGAGTTCCCAATTTCTGAGGTGAGAATAAAAAGTGGAAGCTTGAGCACAGTTGAAACATTGGCATCAACTGCTATTTGTGGAATTATCCACTCAATATTTGGTGGTCAACCTTTGTTAATTGTAGGAGTTGCTGAACCAACTTATCTCATGTACACCTATCTATACAATTTTTGCGCAAAAACACCAGAGTTAGGTGCTCAGCTTTTCTTGGCTTGGGCTGCTTGGTAA 708 0.4237 MASTQSAFAGTIPAPKVRVVAKIRGFSDPDTSFEPSRTVDWVSVSTEISGEVTISFKEQSSSRDLGFLKYAVFVLFVISRYSVDYCYNEHEDNEVIYLNLYLLAPPNLLIPFSSSTVVAYIAPQQVPVQYGGLSREGEQEFTTADPATEVIIKPATKHAVEFPISEVRIKSGSLSTVETLASTAICGIIHSIFGGQPLLIVGVAEPTYLMYTYLYNFCAKTPELGAQLFLAWAAW 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00731 235 Pfam HCO3- transporter family 172 220 IPR011531 GO:0006820|GO:0016020
Vifa2g00731 235 PANTHER ANION EXCHANGE PROTEIN 172 235 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00731 Vifa-Chr2 179767937 179770122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00731 171 235 Antiporters AT5G25430 73.846 3.85e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00731 K24194 - gmx:100808880 116.316