Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00716 ATGATACTAACTCTATACCAAACGTTCCTGTTGAAAGAGCTTTCCATCTCCATTTTCATTTTCTTCATAACCCATTTCATCTTAGCCCTTCTCTCAAAAAACAATCACAGAAAACTTCCACCAGGGCCAAAGGGTTATCCAATTGTAGGCGCACTTCCACTAATGGGAACCATGCCTCATCTGACACTCTTCAAAATGTCACAAAAATATGGACCTATAATGTACCTTAAAATGGGCTCAAACAACATGGTTGTTGCCTCATCTCCTTCATCCGCCAAAGCATTTCTCAAAACACTCGACCAAAACTTCTCAAACCGTCCTTCCAACGCGGGCGCGACACACCTTGCTTACGATTCACAAGACATGGTTTTCGCCGACTATGGATCTAGGTGGAAATTACTTAGAAAACTAAGTAACTTACACATGCTCGGCGGAAAAGCTCTAGAAGATTGGTCCGAAATTCGAGAGTATGAAATGGGACACATGATTCATACAATGTATGATTCTAGCAAGAAAAATGAACCAATTGTTCTACCGGAGATGCTAACATATGCTATGGCTAATATGATAGGTCAAATTATATTAAGCCGTCGCGTCTTTGAAACAAAAGGTTATGAATCAAATGAATTTAAGGATATGGTTGTTGAACTTATGACAACTGCTGGTTACTTCAATATTGGTGATTTTATACCAATTCTTGCTTGGTTGGATCTCCAAGGAATTGAAAGAGGTATGAAGAGTTTACACAAAAAATTTGATGTTTTGTTGACAAAGATGATTGAGGACCATGTGGCTTCTAGTCATAAAAATCCCCGAGTTAAGCCTGATTTCTTGGACACTCTCATTGCTCAAAGTAAACAAGATTCTGATGGAGGAGACAAATTAACACTCACCAACATCAAGGCAGTACTTTTGAATCTATTTACAGCGGGAACAGATACATCTTCAAGTATAATAGAATGGGCCCTGGCAGAAATGTTAAAGAATCCAAACACAATGAAAAGAGCTCATGAAGAAATGGAGAAAGTCATAGGTAAAGAGCGACGGTTACAAGAATCCGACATTCAGAATCTACCTTACTTACAAGCAATATGCAAAGAGACATTCAGAAAACACCCATCAACACCACTAAATCTACCAAGAGTTTCATCAGAAGCATGTGAAGTAAATGGATATTACATCCCAAAAAACACTAGACTAAGTGTGAACATTTGGGCCATAGGAAGAGACCCTAACGTGTGGGAGAATCCATTGGAGTTTAATCCTGATAGGTTTTTGAGTGGTGAGAATGCTAAAATAGATCCACGTGGAAATGATTTTGAGTTGATTCCGTTTGGTGCTGGGAGAAGAATTTGTGCTGGGACAAGGATGGGGATTGTGCTAGTTCAATATATTTTGGGTACTTTGGTGCATTCATTTGATTGGAAGTTGCCAAATGGTATTGTGGAGTTGGACATGGATGAGTCATTTGGGCTTGCTTTGCAGAAAAAAGTACCTCTTTCTGTTGTTGTTAGCCCAAGATTGACTCCATCTGCTTATATTCCTTAG 1548 0.3908 MILTLYQTFLLKELSISIFIFFITHFILALLSKNNHRKLPPGPKGYPIVGALPLMGTMPHLTLFKMSQKYGPIMYLKMGSNNMVVASSPSSAKAFLKTLDQNFSNRPSNAGATHLAYDSQDMVFADYGSRWKLLRKLSNLHMLGGKALEDWSEIREYEMGHMIHTMYDSSKKNEPIVLPEMLTYAMANMIGQIILSRRVFETKGYESNEFKDMVVELMTTAGYFNIGDFIPILAWLDLQGIERGMKSLHKKFDVLLTKMIEDHVASSHKNPRVKPDFLDTLIAQSKQDSDGGDKLTLTNIKAVLLNLFTAGTDTSSSIIEWALAEMLKNPNTMKRAHEEMEKVIGKERRLQESDIQNLPYLQAICKETFRKHPSTPLNLPRVSSEACEVNGYYIPKNTRLSVNIWAIGRDPNVWENPLEFNPDRFLSGENAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVQYILGTLVHSFDWKLPNGIVELDMDESFGLALQKKVPLSVVVSPRLTPSAYIP 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00716 515 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00716 515 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00716 515 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00716 515 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00716 515 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00716 515 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00716 515 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00716 515 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00716 515 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00716 515 PANTHER CYTOCHROME P450 98A9 19 511 - -
Vifa2g00716 515 FunFam Flavonoid 3',5'-hydroxylase 2 31 504 - -
Vifa2g00716 515 Pfam Cytochrome P450 40 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00716 515 SUPERFAMILY Cytochrome P450 40 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00716 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Vifa2g00716 515 Gene3D Cytochrome P450 29 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00716 515 CDD CYP75 71 507 - -
Vifa2g00716 515 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00716 515 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00716 515 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00716 Vifa-Chr2 173810211 173812028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00716 4 513 Cytochrome P450 AT5G07990 47.961 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00716 K13083 - gmx:547705 807.364