Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00704 ATGGTGAGATCTGCAAGTTGTGAAAAAAAATATTGGAATTCTGTCCCCAAAAAAATAGGTATAAAGAGGTGTGGAAAAAGTTACAGACTTAGGTGGAGTAACAACGTGGTTGATGATAAGTTATTCACATTAGAAGAAGAAGATCTTATAGTTAAGCTTCATTCTGCCATAGGTAGTAGGTGGTCTATCATAGCACAACAACTTCCTGAAAGAACAGACAATGATGTAAAGAACAACTGGAACACAAAGCTGAAAAAGAAACTGTCTCAAATGGGGATAGATCCTGTTACACACAAGCCCTTTTCTAAACTCATTGCTGACTATGGAAATATAGGTGCTAAACAAGACTTCAGGAATGTCAATCCCAAAATGGATCTTTCTCACTTCCAAACCATTCCAATAACAAAAATAAATAATGAGGCCAATAATGTTGCACCATTTAGTTGGAATGATTTTCTCCTATTGGAAGCTTTTGCACCACCACTTACTAATAACCAAGATCAAACATTACTTTCAAAGGATATTGTGGTGATCAAACTACAATTAGAGAAAAACAAAGAGGTTGTATCATCATCATCTTCATCGTCATCCTCAGACATTTCATTTGTAGAAGCAATACTCGATCAAGAAAATGAGATGTTTCTAAGCTTCCCCGAACTTTTGGAGGAACCATTCCATTACTGA 684 0.3582 MVRSASCEKKYWNSVPKKIGIKRCGKSYRLRWSNNVVDDKLFTLEEEDLIVKLHSAIGSRWSIIAQQLPERTDNDVKNNWNTKLKKKLSQMGIDPVTHKPFSKLIADYGNIGAKQDFRNVNPKMDLSHFQTIPITKINNEANNVAPFSWNDFLLLEAFAPPLTNNQDQTLLSKDIVVIKLQLEKNKEVVSSSSSSSSSDISFVEAILDQENEMFLSFPELLEEPFHY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00704 227 PANTHER F14D16.11-RELATED 137 227 - -
Vifa2g00704 227 SMART sant 38 86 IPR001005 -
Vifa2g00704 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 88 IPR017930 -
Vifa2g00704 227 ProSiteProfiles Myb-like domain profile. 42 84 IPR001005 -
Vifa2g00704 227 FunFam Os07g0634900 protein 41 100 - -
Vifa2g00704 227 Pfam Myb-like DNA-binding domain 42 82 IPR001005 -
Vifa2g00704 227 SUPERFAMILY Homeodomain-like 9 80 IPR009057 -
Vifa2g00704 227 CDD SANT 42 84 IPR001005 -
Vifa2g00704 227 Gene3D - 40 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00704 Vifa-Chr2 170580669 170581679 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00704 10 107 MYB Transcription Factor Family AT5G56110 63.366 5.35e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vifa2g00704 Myb_DNA-binding 6.7e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00704 K09422 - rvl:131299211 171.4