Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00699 ATGCTTAGTCCTGAAGGTGAACTGAAAATAAGCTTCGGCTATCAATGCAATGACGACAGAGGTATCCCTTGCAAGGTTGCCAAAGGCTGCAAAATCCTTCCTGAAATGCGAAGAACAAGCAGTTTCTCTTGTTTGTCTGGTGATGCTTTGAGTGCAAATGCTACACTTGCCAACACAAACATCTGCAATGGTGTGATAGGAGAAGAAATCCTTCCGAATTTGGACTCTCCTAATTCATTTCGGCGGGTTCCCTCTTCGCCATGTCTTGGAATGTTGGACATGCTATCATCTTCTTTCCAAAGTAGTTTGTCAAACCTAAGTTGCAGCCCATCCAGTCCAAGTCTTATGCTTGAATACGACCCTTGTTTGTTAAGACTCATGAGTCCTTCCTCTAGAAATGAAAGTTTTCTCAATGCAACAGAAGTACAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGTTGGCTATTTTGTGCAATTTATGACGGATTTAATGGGAGAGATGCGGCGGATTATCTTGCTTGTACTCTTTATGACTCTATTGTATCTTATCTTGCTTGTACTCTATTGTTGGTTTCCGATTTCGTTCGACTTTGCTTTAAATATGAAGGTTCTGCAGTTCAGTGCAGTAATCAAATTGGTGTAAGTAATGGTGACTCTGCATCTGTACCGTATTTGAAGGATTGGCATTTTGTGAAGGAGTATCCTGATTACGTACCATACATCACTCCGATGTTCTTTTGTGATGATTGGCTCAACTTGTATCTCGATAACTTTAGAATGAATACTTATTCCGACAGAGACCAGCAAAATAAGGAAATATGTTGCTCTGACTATCGTTTTGTTTACATGGGAGTAAAAGGATCTTGGACTCCTCTACATGCTGATGTTTTCAGAGCAGCTCCGAAGGCTCTTCAAATTGATGAAGATGGTGAGAAAATCAGATAG 975 0.4072 MLSPEGELKISFGYQCNDDRGIPCKVAKGCKILPEMRRTSSFSCLSGDALSANATLANTNICNGVIGEEILPNLDSPNSFRRVPSSPCLGMLDMLSSSFQSSLSNLSCSPSSPSLMLEYDPCLLRLMSPSSRNESFLNATEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADYLACTLYDSIVSYLACTLLLVSDFVRLCFKYEGSAVQCSNQIGVSNGDSASVPYLKDWHFVKEYPDYVPYITPMFFCDDWLNLYLDNFRMNTYSDRDQQNKEICCSDYRFVYMGVKGSWTPLHADVFRAAPKALQIDEDGEKIR 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00699 324 Gene3D Cupin 194 311 - -
Vifa2g00699 324 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 210 308 - -
Vifa2g00699 324 SUPERFAMILY Clavaminate synthase-like 203 308 - -
Vifa2g00699 324 SUPERFAMILY PP2C-like 147 206 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00699 Vifa-Chr2 166245149 166246429 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00699 4 194 PP2C-type Phosphatase Gene Family AT3G16560 69.036 5.31e-74 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00699 - - mtr:112419487 328.176