Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00653 ATGATTCAACCTCAACCCTATTTAAATGTAGTCGATAATAGTGAAGCGCGCGAATTGATGTGTATTCGAATCATAGGAGCTAGTAATCGAAGGTATGCTTATATTGGTGACATTGTTGTTGCTGTAATAAAAAAAGCAGTGCCAAATTCATCTTTAAAAAGATCTCAAGTCATCAGAGTTGTAATTGTACGTACTTGTAAAGAACTAAAACGCCGTAATGGTATAATTATAAAGTATGATAATAATGCGGCGATTCTCATAGATAAAGAAGGAAATCCAAAAGGAACTCGTATTTTTTCCGCAATAGCCCGAGAATTGAGACAGTTAAATTTCACTAAAATAGTTTCATTAGCACCTGAGGTATTATAA 369 0.336 MIQPQPYLNVVDNSEARELMCIRIIGASNRRYAYIGDIVVAVIKKAVPNSSLKRSQVIRVVIVRTCKELKRRNGIIIKYDNNAAILIDKEGNPKGTRIFSAIARELRQLNFTKIVSLAPEVL 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00653 122 Gene3D Ribosomal protein L14 1 122 IPR036853 GO:0003735|GO:0005840|GO:0006412
Vifa2g00653 122 SMART Ribosomal_L14_2 1 122 IPR000218 GO:0003735|GO:0005840|GO:0006412
Vifa2g00653 122 FunFam 50S ribosomal protein L14, chloroplastic 1 122 - -
Vifa2g00653 122 NCBIfam 50S ribosomal protein L14 1 122 IPR005745 GO:0003735|GO:0006412|GO:0015934
Vifa2g00653 122 SUPERFAMILY Ribosomal protein L14 1 122 IPR036853 GO:0003735|GO:0005840|GO:0006412
Vifa2g00653 122 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 121 IPR000218 GO:0003735|GO:0005840|GO:0006412
Vifa2g00653 122 Pfam Ribosomal protein L14p/L23e 1 122 IPR000218 GO:0003735|GO:0005840|GO:0006412
Vifa2g00653 122 Hamap 50S ribosomal protein L14 [rplN]. 1 122 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00653 Vifa-Chr2 151905331 151905699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00653 8 118 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 32.174 3.32e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00653 K02874 - gmx:3989333 207.223