Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00648 ATGGATTCTCTCAAAATTTTCCAAGGTTACGACAAAGTGGAAACCAACCTCGAAGATCAACAAAATCACCAGCATCACCGCCACAAAATCTCTAAACCCCTCGTCGCCACAATTTCCATCATCATCATCATCACCATCCTCTTCCTCACCCTTTTCTTCCACCACACCGAGTCACAAACCCCCCTCAACTCACCCGACTCACTCAGATCCATTTGCAACGTAACCCACTTCCCTGGCTCATGCTTCACCGCTCTATCTCCCTCCTCACAAAACCTCACCAACCCAAACTCCATCCTCAAACTCTCCATCCTCGCCTCCGTCGACGAGCTCACCAAACTCACTTCATCGCTAAAAGACAATTCCGACAACCAGGCGCTCGACGATTGCAAGGAACTAATAGACGACGCGGTGAGTCGACTCAACGAGTCAGTTTCGGCAATTCCTGACGGTGCCGTAACGTTGACGGATGGTAAAATTAAAGATATTCAGACGTGGGTTAGTGCCGCGTTGACGGATCAACAAACGTGCGTTGATGGGTTAGAAGAAGTTGGGATTTCTTTGGAGACTGTTGAAAAGGTAAAGAAAATGATGCAGAAATCAAATGAGTATACCAGCAATAGTTTGGCTATTGTGGCTAGTATAAACAATTTGTTACCAATTCATTGA 666 0.4625 MDSLKIFQGYDKVETNLEDQQNHQHHRHKISKPLVATISIIIIITILFLTLFFHHTESQTPLNSPDSLRSICNVTHFPGSCFTALSPSSQNLTNPNSILKLSILASVDELTKLTSSLKDNSDNQALDDCKELIDDAVSRLNESVSAIPDGAVTLTDGKIKDIQTWVSAALTDQQTCVDGLEEVGISLETVEKVKKMMQKSNEYTSNSLAIVASINNLLPIH 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00648 221 FunFam Pectinesterase 64 215 - -
Vifa2g00648 221 CDD PMEI-like_3 70 214 - -
Vifa2g00648 221 Gene3D Invertase/pectin methylesterase inhibitor family protein 64 215 IPR035513 -
Vifa2g00648 221 Pfam Plant invertase/pectin methylesterase inhibitor 67 210 IPR006501 GO:0004857
Vifa2g00648 221 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 212 IPR035513 -
Vifa2g00648 221 PANTHER PECTINESTERASE 42 212 - -
Vifa2g00648 221 SMART PMEI_2 63 210 IPR006501 GO:0004857
Vifa2g00648 221 NCBIfam pectinesterase inhibitor domain 39 212 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00648 Vifa-Chr2 151377923 151378588 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00648 1 221 Carbohydrate Esterase AT1G53840 36.145 5.36e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00648 - - gmx:100789567 209.534