Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00635 ATGGAGAATATTGATCAACTCCCTGTTTGGAAATATGATCATGCAATGCAAGATTATGATCCATTTCTTCCTCCTTTTCCATCATCTTCATATGATAATAATAATAATTTTCTGTACAGAGGAAACTCAAGTGATGGTTATATTTCAAAAGATTGGTCGTCACATTATGAATTTCCCATGCAAGATACCTGTTTTGATGCTATCCCCATCAAGGAATATTATCATCCTGAATATCAATATGAAACTTTTCCTAATGAACTATCAACTCAGATAAGCATACAAGATTATGGCTTTTGTGATGCTAAAAATGAGATTTTAACATGGAGTGAAATTGATGCTGGATTATATTCGGATGAAAATGTGTTTTCTATTAGCAACAATGTTGTAGAAAATAATGCAACGGAAAATGTGAAGGGTAAACGATGTAGAGAAGAGAATAATAATAGTGCAAGAATGTTAACAAGGAAGAATATTTCTGAGTATTTCTACATGCCAATATCACAAGCTGCTAGAGAGCTTAATGTTGGACTTACACATTTGAAGAAAAGGTGTAGGGATCTTGGAATCCAAAGGTGGCCTCATAGGAAACTAATGAGTCTTCAAACCCTTATTAAGAATGTTCAAGAGCAGGGAAATGAGAGTGATGAAAAAATAATGAATGCTGTGGAAATATTGAAGAAAGAAATGAAGATGGTAGAGGAAAAACCAGATTTGCAACTCGAAGAAAATACAAAAAGACTTAGACAAGCATGTTTCAAGGCTAATTACAAGAAGAGAAGATTAATGGTCATGAGTTTAATGGATCAACAGCATTCTTCTCTAAGTGAAAGTGAAAGTGTTAATAATTACAAAATGGGATAA 861 0.3298 MENIDQLPVWKYDHAMQDYDPFLPPFPSSSYDNNNNFLYRGNSSDGYISKDWSSHYEFPMQDTCFDAIPIKEYYHPEYQYETFPNELSTQISIQDYGFCDAKNEILTWSEIDAGLYSDENVFSISNNVVENNATENVKGKRCREENNNSARMLTRKNISEYFYMPISQAARELNVGLTHLKKRCRDLGIQRWPHRKLMSLQTLIKNVQEQGNESDEKIMNAVEILKKEMKMVEEKPDLQLEENTKRLRQACFKANYKKRRLMVMSLMDQQHSSLSESESVNNYKMG 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00635 286 PANTHER PROTEIN RKD4 143 281 IPR044607 GO:0003700
Vifa2g00635 286 ProSiteProfiles RWP-RK domain profile. 134 221 IPR003035 -
Vifa2g00635 286 Pfam RWP-RK domain 153 200 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00635 Vifa-Chr2 143796749 143798067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00635 140 265 AtRKD Transcription Factor Family AT1G18790 60.902 3.59e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Vifa2g00635 RWP-RK 2.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00635 - - psat:127081291 520.005