Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00634 ATGGCTACCGTTACTACACAAGCTTCCGCCGCGGTTTTCCGGCCATGTGGTTTGAAATCGAGATTTCTTGGTGGTTCTTCAGGGAAGTTGAACAGAGAAGTGGCTTTTAGGTCAGTTGGGTGTTCACCTTCTGCTTCTTTTAAAGTTGAAGCTAAGAAAGGAGAGTGGTTGCCAGGTTTGGCCTCCCCAGGTTACCTCACTGGCAGTCTTCCCGGAGACAATGGATTTGATCCATTGGGACTCGCGGAGGATCCAGAGAATTTGAGGTGGTTTGTTCAAGCTGAGCTAGTGAACGGGCGTTGGGCTATGTTGGGTGTTGCAGGGATGTTACTCCCTGAGGTATTCACAAGCATTGGAATCATCAATGTTCCAAAATGGTACGATGCAGGGAAAGAAGAATACTTTGCTTCATCTTCAACACTCTTTGTGATTGAGTTCATTTTGTTCCATTACGTTGAGATTAGAAGATGGCAAGACATTAAGAACCCTGGCAGTGTTAACCAAGATCCTATCTTTAAGCAATACAGCTTGCCAAAAGGTGAGGTCGGTTACCCTGGTGGGATCTTTAATCCTTTGAACTTTGCACCAACTTTGGAGGCTAAAGAGAAGGAAATTGCAAATGGGAGATTGGCGATGTTGGCATTCTTGGGATTTATAATTCAGCACAACGTGACAGGAAAAGGACCATTTGATAACCTGTTGCAGCACATTTCTGATCCATGGCACAACACCATTGTTCAAACACTGGGTGGAAACTAA 759 0.4493 MATVTTQASAAVFRPCGLKSRFLGGSSGKLNREVAFRSVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTLGGN 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00634 252 Pfam Chlorophyll A-B binding protein 63 222 IPR022796 -
Vifa2g00634 252 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 32 248 IPR001344 GO:0009765|GO:0016020
Vifa2g00634 252 SUPERFAMILY Chlorophyll a-b binding protein 53 249 - -
Vifa2g00634 252 Gene3D Chlorophyll a/b binding protein domain 63 242 - -
Vifa2g00634 252 FunFam Chlorophyll a-b binding protein, chloroplastic 63 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00634 Vifa-Chr2 143268723 143270069 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00634 43 245 Chloroplast and Mitochondria Gene Families AT3G61470 53.774 3.10e-74 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00634 K08910 - rcu:8263414 472.626