Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00609 ATGCAAGACGCAATTCATCATCCAACAACCAACATGAAGAGAATCCTCAGTAGGAATCACGACGGCGAAGAACTTGTACCGGATTCGCACACTCGTTCTCCTTCAATTTCCAACAGAAAATGTTCCGTTGCCACTTCCTTGCCCTTATTCGCTTCCCTCTTTCTCATTACTCTCTCCCTCTTCTCTCTTTCGTTTATTCTTCCGCATTCTCCAGCAACACCTACTACTACTAGTACTATTCGACAACAAGGTTTGAACAGTGATGCCTCTGATTCTGTTAAGTTCATAAAAGATAAACTACTAGGTGGACTTCTAGCAGCTGGATTTGACGATGGATCATGTCTCAGTAGGTATCATTCAGTTAAAGGACTATCAGGGAATCTCTCCTCTTACCTCGTCTCCAGATTAAGAAAGTATGAAGCACTTCACAAAAAATGCGGACCTTATACTGAATCCTACAATAAAACGGTGAAAGATCTCAGTTCAGGTCACTTAAGCGAGTCCCCGGATTGTAAATATGTGGTTTGGATTTCATTTAGTGGTTTAGGGAACAGGATATTGACCTTGGCTTCTGCATTTCTTTATGCTCTCCTCACAAACCGTGTTCTTTTGGTTGATCCTGGAGTTGATATGGCTGATCTTTTTTGCGAACCGATTCCAGATGTTTCATGGTTTCTCCCTCCTGATTTCCCTCTAAACAGTCAATTTCACGGTTTCAATCAGGAATCTGATCAATGTCATGGAAAAATGCTGAAAAATAAATCAGTCACAAATTCAGAAGTTCCTTCTTCTGTCTACCTTCATTTGGTACATGATTACAGTGATGAGGATAAGCTTTTCTTTTGCGATGAAGAACAGAAATTTTTGCAGAAAGTACCTTGGTTAATAATGAAAACAGATAATTACTTTATTCCATCGCTATTCTTGATGCAGTCTTTTGATCAGGAGCTCAGTAATCTCTTTCCAAACAAGGATAAAGTTTTCCATTTCTTAGGCAGGGTTTTCGACACTAGACCCGGTCCATTTCAATATGTATTGGATCAAATCCTAGCTTGCACTATGAAGGAAAATCTCTTGCCTGATATTGACAAGAAGCATGATATTACTGGTTCATTAGGAAGTTCAAATTCGAAAGCGATACTAATGACATCCTTAAGCTCTGGCTATTTCGAAAAAATAAGAGACATGTATTGGGAATATCCAACGCTGACCGGAGAAGTTATCAGTGTATACCAACCAAGCCATGAGGGATATCAGCAAACTGAAAAGCAAATACACAATCAAAAAGCTTGGGCGGAAATGTATTTATTGAGTTTAACCGATGTGTTGGTGACTAGCTCCTGGTCTACTTTTGGCTACGTGGCGCAGGGGCTCGGAGGTTTGAAACCTTGGATACTATACAAACCTGAGAATGAAACAGCTCCTGATCCTCCTTGTCGACGTGCAATGTCGATGGAGCCGTGTTTTCATGCTCCTCCTTTCTATGATTGTAAGGCTAAGAGAGGAGCTGATACAGGTGCACTTGTTCCACATGTAAGACATTGTGAGGATATGAGTTGGGGTCTTAAAATTGTAGACAATTAA 1584 0.404 MQDAIHHPTTNMKRILSRNHDGEELVPDSHTRSPSISNRKCSVATSLPLFASLFLITLSLFSLSFILPHSPATPTTTSTIRQQGLNSDASDSVKFIKDKLLGGLLAAGFDDGSCLSRYHSVKGLSGNLSSYLVSRLRKYEALHKKCGPYTESYNKTVKDLSSGHLSESPDCKYVVWISFSGLGNRILTLASAFLYALLTNRVLLVDPGVDMADLFCEPIPDVSWFLPPDFPLNSQFHGFNQESDQCHGKMLKNKSVTNSEVPSSVYLHLVHDYSDEDKLFFCDEEQKFLQKVPWLIMKTDNYFIPSLFLMQSFDQELSNLFPNKDKVFHFLGRVFDTRPGPFQYVLDQILACTMKENLLPDIDKKHDITGSLGSSNSKAILMTSLSSGYFEKIRDMYWEYPTLTGEVISVYQPSHEGYQQTEKQIHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENETAPDPPCRRAMSMEPCFHAPPFYDCKAKRGADTGALVPHVRHCEDMSWGLKIVDN 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00609 527 MobiDBLite consensus disorder prediction 14 28 - -
Vifa2g00609 527 Gene3D - 169 213 - -
Vifa2g00609 527 MobiDBLite consensus disorder prediction 1 33 - -
Vifa2g00609 527 FunFam Galactoside 2-alpha-L-fucosyltransferase 169 220 - -
Vifa2g00609 527 PANTHER FUCOSYLTRANSFERASE 2-RELATED 53 334 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vifa2g00609 527 Pfam Xyloglucan fucosyltransferase 93 333 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vifa2g00609 527 Pfam Xyloglucan fucosyltransferase 333 498 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00609 Vifa-Chr2 133606500 133609261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00609 98 525 Xyloglucan Fucosyltransferase1 AT2G03220 62.284 0.0 597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00609 2 133606500 133609261 Vifa2g00609 2 133606500 133609261 ECH