Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00587 ATGGCGCTGTTCCGAAGATTATTTTACCGGAAGCCGCCGGATCGTCTTCTCGAGATCTCTGAGAGAGTCTATGTTTTTGATTGCTGCTTCTCTACGGGCGTCTTGGAAGAAGATGAGTACAAATTGTATATGGGGGGAATTGTAGCTCAGCTACAAGATTACTTTCCAGATGCTTCTTTCATGGTGTTCAATTTCAGAGAAGGGGATAGGCGCAGCCAAATTTCAGACATATTATCTTTATGTGACATGACAGTTATGGAGTACCCTCGGCAATACGAGGGCTGTCCACTTCTTCCTCTAGAGATGGTTCATCATTTCCTTCGATCAAGTGAAAGCTGGCTCTCTTTGGAGGGGCAGCAAAATGTGCTTTTGATGCACTGTGAAAGAGGGGGTTGGCCTGTGCTGGCATTTATGTTAGCCGGTCTTTTATTGTACCGAAAGCAATATAGTGGGGAGCTGAAGACTCTTGAAATGGTCTACAAGCAAGCACCCAGAGAACTTCTCCAGCTTTTATCTCCTTTGAACCCACAGCCTTCTCAGTTAAGATATCTTCATTATATTTCCAGGAGAGATTTGGGTTCTGAGTGGCCTCCGTCAGACACACCTTTATATTTAGATTGTGTAATTCTAAGAGTTCTTCCATTATTTGATGGTGGGAAAGGTTGCAGGCCTGTTGTAAATGTTTATGGTCCGGACCCTTCAAATCCTGCCAATAGAAGTTCTAAGCTTCTTTTCTCAACTTCAAAAGTCCAAAATCATGTTCGCCACTACCTGCAGGCAGAGTGTATGCTCGTGAAAATTGATATTCATTGTCGTGTTCAAGGGGATGTCGTTCTTGAATGTATACATTTAAGCGAAGATTTCGTTAGTGAGGAGATGATGTTTAGAGTCATGTTTCATACTGCATTTATACGGTCAAATATTTTGGTGCTGAGCCGTGATGAAATCGATATATTGTGGGATACAAAGGATCAGTTCCCCAAGGATTTTAAATCTGAGGTGCTTTTTTTGGATGCTGATGCTGTTATACCTAATCTAACCACAGTCAATGTGAGTGAAGAAGATGAAAATGAGACAGAAAGCGGTTCACCTGACGAATTCTATGAAGTGGAAGAGATTTTCAGCAATGTAATTGATGCACAGGATTCTCCAAAGTTTCGTCAAAATGCAGGAGATGATGGAAGCCTTAAAGATGTCTGGAAAGAGTATTCAGATCCTCCTACTTTTCAGGATTCCACGCCAGATGATGGGTTTAACCAACAGGTTGAATGGACAGATTCTGTTATTAACGAGGTGAAAGACATCACTGTTGATGATGTGAAATACAAGCTTGATGAGCTTGTAGATTCAGATACTCATGCAGTGAAAGATATTGCTGTGGATGGTGGAGAAAATAAGTTAACTTCCACTGCTGTTACTTTTGACATGATGGAAACCCCGGAGAGACAAGAAGTCAATTTGGATGTGCACGATGAGTTAGCAGTTAAGCGAAACAATTATGACGAAGATAACAATGCAACACTTCAAGAATTAGAGCCCGAGGAAGGGCAGCAGATGCATGATCTTGCCGGATCAATATCTGTTGAAAAGAAACAACTTCCTTCTGACCCAAAGCCAGTGGAAGGCGTAGTTGTAGAAAAGCAAAAGGCTAAACAGAAAGAACCACGGGGATTTCAGGAAAAACAAGCAAACGAAAATGCAACAACTAGGTGGATACCTTCTAATAAAGCTTCTTATCAAGATTCAATGCATGTTTCATATCCACCGAGAAGGCATAATAGTTCACCATCTATTCTGTCAAATACTACCTCTGCAAAGGAGAAAATTACTAATGCCAAAGGAAGACGTATTTCTTCGACAAATGATCTGAAAAGTTGTAATGGGGACAATTCAAAATCTCTAGAAAGCATATGGGAAATTGATTCAAACGCCCAGCTATCACCATTGATACCAATTACAGAGTCATTTCATCAGTCAGCTACTCAAGCACTACAGTTAAGCATTGATCAAGTGCTACAACCTCATATCCCCCCTTTCGCTCCACCCCCAACTCCACCCCCAACACCATCTTCTTCCTTGGATGGTAAAGTGTCTACGATACCGCAACCCCCGCCTCAACCGCCTCCTCAACCTCCAGCACCACCTCCACCTTTTTTGTCAGGTTTTGGTAAGAAAAATGAAGAGATGGATTTACAAGCTGCAACTTATCCTCCTCCACCCCCACCTCCGCCTTCATTTTCTGCGCAAAATAGAGGGAGCTCATTACCTCTTTCTACTCACAGGAAGCCCTATTATTCATCGATTGGTGTAGGTGGAGAAAATGGTGGTGCTTTACCTCCTTCAACTCCTATAGTAGGAAGTGTTTTTGCATCAAAAGTTTATAAATTAGTTGATGCAGTCATTCTTCCCATTCCTCCACCACCACCACCACCACCTCCACCCTCTTCTTCTCTCCCCCCAAAATATGGAGTTACATCCATTCCTCCTCCACCACCTCCACCACCTTTGTCTTATATGGATAGAGCTCCACCACTCCTTCCTCCTATAACACCAACATTACTTAATGCTCCACCACCACCACCTTTAAATATATCTCAACCTCCACCTCCACCACCATTGCCTTCTACTCCTCCTGTTGTATATAAAGCCCTACCACCATCTCCTCCACCACCACCTTTTTGTAAAGCTCCATCAACCCCACTTGCTATTAGTATAGCTCCACCGCCTCCACCTCTTCTTTCTACAAGTAAAACACAACCTCCGCCGCCACCACCACCTCTTCCTTCATCAACTGAAGAACCTCCACCACCACCACCACCTCCTTCAATGTCTAAGGCCCCACCACCCCCACCCCCACCTCCACCATTCTTTGGAGCTCCACCATCACCACTTCTTCCTAGATCGAGTGGAGCACCTTCACCACCACCTCCACCTCCTTTGTCCAAGGCTCCACCCACAACCCCACCATTCTATGAAACTCCACCACCGCCACCTCCTTTGTCCAAGGCTCCACCCCCACCCCCACCCCCACCATTCTATGGAACTCCACCACCACCACCTCTTTTTTCATCAAGTGGAGTACCTCCACCGCCATCTCCTTCATTGTCTAAGGCACCACCACCACCCCCACCTCCACCTCCACCTCCACCATTCTATGGTACTCCACCACCACCCCCACCATATCTTCCTACATTAAGTGGAATACCTCTAACACCACCAACTCTTGCAATGTCTAAGGCCCCACCTCCACCACTCAATAGAGCTCCACCACCACCACCACCACAGTATCTTCTTGCATCTAGTGGAGCACCTCAACCACCACCACCACCTCCTTCAATGTCTAAGACCCCACCTCCACCATTTTATGGGGCTCCACCACCACCATCATATCTTCCTATATCTAGTGGACCACCACCACCACCACCACCACCACCTCCTTCAATTGGAGCACCACCACCACCACCATATCTTCCTGCATCTAGTGGAGCACCACCACCACCACCACCACCACCATATCTTTCTGCATCTAGTGGAGCACCACCACCACCACCTCCCCCATTTTATGGAGCAACTCCACCACCACCACCTCCCCCATTTTATGGAGCAACTCCACCACCACCACCTCATTCACTGTCTAAGGCCCCACCACCCCCACCTCCACCATTCTACGGAGCAACACAACCGCCACCACCTCCCATGCATGCAACAAAAGCACCACCTCCTCCACCACCTCCGGGTGGTCAAGGCCCACCTCCTCCTCCACCTCCAGGTTTTCGAGGCCCACCTCCTCCGCCACCTCCAGGTTTCCGAGGCCCACCTCCCCCGCCACTTCCAGGTGGCCAAGGCCCACCTCCTCCTCCACCTCCAGGTGGTCGAGGCCCTGCTCCACCACCTCCTCCTGGAGCTCATGCACCTGGTGCTCCCGCACCTCCTAGACCTCCAGGTGGTGCACCCCCACCGCCTGGGGCTGATCCAAGAGGTAGAGGGCGTGGACTTGCACGTCCTACTGGTGCAGCGGCACCTCGACGATCCTCCTTAAAGCCTCTTCATTGGAGTAAGGTAACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAAACTCAAATTGGACAAGAGTTTGACGTTTCAGAGTTAGAGAAGCTTTTTGCTGTAAATGTTCCCAAACCTGCTGCTTCTGGTGGTAAATCTGGAGGGCTAGGCAAGTCTGCAGGATCCAAACCTGAGAAAATTACCTTGGTTGATTTAAGGAGAGCCTATAATACTGAAATTATGCTTACAAAGGTTAAGATGCCTCTACCGGATATGATGGCTGCAGTACTGGCTTTGGATGACTCAGTATTAGATGTTGATCAGGTGGAAAATCTTATTAAATTTTGTCCTACCAAAGAGGAAATGGATCTTTTGAAGGCATATACTGGCAACAAGGAGAATTTGGGAAAGTGCGAACAGTTCTTTATGGAGCTGATGAAAGTGCCACGAGTTGAGTCGAAATTAAGAGTATTCTGTTTCAAGATTCAATTTCAGTGTCAGATTACAGAGTTTAATAAGAGTTTAAACTTAGTGAACTCTGCATGTGAAGAGGTCCGAAATTCAGTCAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGTAATGCATTGAATCAAGGAACAGCAAGAGGATCTGCTGTTGGATTTAAGTTAGACAGCCTTTTAAAGCTCACCGACACTCGTGCTTCTAACAGCAAAATGACACTGATGCATTATCTTTGCAAGGTCCTAGCTGAAAAGTTTCCTACACTCCTTGATTTTCACCTTGACCTAGTTAGCGTAGATACTGCCTCTAAGATACAATTGAAGTCATTAGCAGAAGAAATGCAGGCAATTACCAAGGGACTAGAAAAAGTAAACCAGGAGCTTGCTGCTTGTGAAAGTGATGGCCCAGTATCTGAAGTTTTCCGTAAGACATTGAAAGATTTCGTTAATGAAGCCAAGTCTCAGGTGGATTCTGTAACACGCCTATATTCTGATGTGGGTAGAAATGCAGACGCACTTGCACAGTATTTCAATGAGGATCCTGCTCGTTGTCCTTTTGAGCAAGTTACTGCAACTCTGTTAAATTTTATAAGGATGTTTCTCAAAGCACATGATGAGAATATCAAACAAGCAGAATTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGAAAGCTAAGAAGGAGGCTGAAATGGAAAAGGGTAAAAGCAGTGGTTTGACAAGGAAGAGTAAAAAAGATAAAGAAGAAGAAAGCTGA 5298 0.4566 MALFRRLFYRKPPDRLLEISERVYVFDCCFSTGVLEEDEYKLYMGGIVAQLQDYFPDASFMVFNFREGDRRSQISDILSLCDMTVMEYPRQYEGCPLLPLEMVHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGELKTLEMVYKQAPRELLQLLSPLNPQPSQLRYLHYISRRDLGSEWPPSDTPLYLDCVILRVLPLFDGGKGCRPVVNVYGPDPSNPANRSSKLLFSTSKVQNHVRHYLQAECMLVKIDIHCRVQGDVVLECIHLSEDFVSEEMMFRVMFHTAFIRSNILVLSRDEIDILWDTKDQFPKDFKSEVLFLDADAVIPNLTTVNVSEEDENETESGSPDEFYEVEEIFSNVIDAQDSPKFRQNAGDDGSLKDVWKEYSDPPTFQDSTPDDGFNQQVEWTDSVINEVKDITVDDVKYKLDELVDSDTHAVKDIAVDGGENKLTSTAVTFDMMETPERQEVNLDVHDELAVKRNNYDEDNNATLQELEPEEGQQMHDLAGSISVEKKQLPSDPKPVEGVVVEKQKAKQKEPRGFQEKQANENATTRWIPSNKASYQDSMHVSYPPRRHNSSPSILSNTTSAKEKITNAKGRRISSTNDLKSCNGDNSKSLESIWEIDSNAQLSPLIPITESFHQSATQALQLSIDQVLQPHIPPFAPPPTPPPTPSSSLDGKVSTIPQPPPQPPPQPPAPPPPFLSGFGKKNEEMDLQAATYPPPPPPPPSFSAQNRGSSLPLSTHRKPYYSSIGVGGENGGALPPSTPIVGSVFASKVYKLVDAVILPIPPPPPPPPPPSSSLPPKYGVTSIPPPPPPPPLSYMDRAPPLLPPITPTLLNAPPPPPLNISQPPPPPPLPSTPPVVYKALPPSPPPPPFCKAPSTPLAISIAPPPPPLLSTSKTQPPPPPPPLPSSTEEPPPPPPPPSMSKAPPPPPPPPPFFGAPPSPLLPRSSGAPSPPPPPPLSKAPPTTPPFYETPPPPPPLSKAPPPPPPPPFYGTPPPPPLFSSSGVPPPPSPSLSKAPPPPPPPPPPPPFYGTPPPPPPYLPTLSGIPLTPPTLAMSKAPPPPLNRAPPPPPPQYLLASSGAPQPPPPPPSMSKTPPPPFYGAPPPPSYLPISSGPPPPPPPPPPSIGAPPPPPYLPASSGAPPPPPPPPYLSASSGAPPPPPPPFYGATPPPPPPPFYGATPPPPPHSLSKAPPPPPPPFYGATQPPPPPMHATKAPPPPPPPGGQGPPPPPPPGFRGPPPPPPPGFRGPPPPPLPGGQGPPPPPPPGGRGPAPPPPPGAHAPGAPAPPRPPGGAPPPPGADPRGRGRGLARPTGAAAPRRSSLKPLHWSKVTRALQGSLWEELQRHGETQIGQEFDVSELEKLFAVNVPKPAASGGKSGGLGKSAGSKPEKITLVDLRRAYNTEIMLTKVKMPLPDMMAAVLALDDSVLDVDQVENLIKFCPTKEEMDLLKAYTGNKENLGKCEQFFMELMKVPRVESKLRVFCFKIQFQCQITEFNKSLNLVNSACEEVRNSVKLKEIMKKILYLGNALNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLAEKFPTLLDFHLDLVSVDTASKIQLKSLAEEMQAITKGLEKVNQELAACESDGPVSEVFRKTLKDFVNEAKSQVDSVTRLYSDVGRNADALAQYFNEDPARCPFEQVTATLLNFIRMFLKAHDENIKQAELEKKKAEKEAEMEKKAKKEAEMEKGKSSGLTRKSKKDKEEES 1765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00587 1765 MobiDBLite consensus disorder prediction 1725 1765 - -
Vifa2g00587 1765 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1284 1731 - -
Vifa2g00587 1765 SMART PTEN_C2_2 198 1389 IPR014020 -
Vifa2g00587 1765 MobiDBLite consensus disorder prediction 675 690 - -
Vifa2g00587 1765 Pfam Formin Homology 2 Domain 1342 1711 IPR015425 -
Vifa2g00587 1765 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Vifa2g00587 1765 MobiDBLite consensus disorder prediction 1075 1325 - -
Vifa2g00587 1765 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Vifa2g00587 1765 MobiDBLite consensus disorder prediction 547 630 - -
Vifa2g00587 1765 MobiDBLite consensus disorder prediction 561 630 - -
Vifa2g00587 1765 MobiDBLite consensus disorder prediction 674 776 - -
Vifa2g00587 1765 Gene3D Formin, FH2 domain 1355 1751 IPR042201 -
Vifa2g00587 1765 MobiDBLite consensus disorder prediction 801 1067 - -
Vifa2g00587 1765 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Vifa2g00587 1765 MobiDBLite consensus disorder prediction 801 1348 - -
Vifa2g00587 1765 PANTHER FORMIN-J 1250 1743 - -
Vifa2g00587 1765 SMART it6_source 678 1765 IPR015425 -
Vifa2g00587 1765 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Vifa2g00587 1765 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1336 1737 IPR015425 -
Vifa2g00587 1765 MobiDBLite consensus disorder prediction 700 719 - -
Vifa2g00587 1765 Gene3D Protein tyrosine phosphatase superfamily 14 203 IPR029021 -
Vifa2g00587 1765 Coils Coil 1618 1638 - -
Vifa2g00587 1765 Gene3D - 204 336 - -
Vifa2g00587 1765 Coils Coil 1712 1746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00587 Vifa-Chr2 124907245 124921535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00587 1 619 FH2 protein (formin) Gene Family AT5G07740 60.856 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00587 - - mtr:25488802 1202.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00587 2 124907245 124921535 Vifa2g00587 2 124907245 124921535 ECH