Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00552 ATGTTAGGAAGGAGAGTGTTCAATGATGAGAATCATGGTAATGACCCTAAAGCGGATGACTTCAAGAATATGATTCTTGAAGCAATGGTGTTAGGTGGAGTTTTCAACATTAGTGATTTCATTCCTTCATTGGAATGGTTAGACCTTCAAGGAGTTCAAGCCAAAACCAAAATATTACACAAGAAATTTGATGCATTCTTAACAAACATTATTGAGGAACATGAGACTTCTAATTCTAAGAGTGAAAAACATAAGGATTTGCTGACTACTTTGTTGGCACTTAGAGATGAAGGAGATGATGAAGGAAATAAACTCACCAATATTGAGATCAAAGCACTTCTTTTAAACATGTTTGTAGCTGGAACAGATACATCATCAAGCCGAGACAGGAACGTGAAAGAAGAGGACATACAAAACCTACCTTACCTACATGCAGTCATAAAAGAAACATTTCGTTTGCATCCATCAACACCTCTTTCCCTTCCAAGAATCGCTTCAGAAAGTTGTGAGATATTTGGATACCACATTCCTAAGGGTGCAACTGTTTTGATTAACGTATGGGCCATAGCTCGTGACCCAAAACAATGGGATGACCCATTAGTATTCAAGCCCGAAAGATTCTTACAAGGAAGTGACAAATGTGATGTTGATATTAAGGGAAATAATTTTGAAGTTATACCTTTTGGTGCTGGACGTAGAATTTGTGTTGGGATGAGTCTTGGGCTTCGTACGGTTCAACTTTTAACTGCTACGTTGGCCCATTCGTTTAATTGGGAACTTGAAAATGGACTCAAACCTGAAAATATGAACATGAATGAAGCTTTTGGACTTACTCTTCAACGAGCTGTGCCGTTATCTGTGTACCCAAAATGCAGACTCTCGCCTAATATGTATTCATCAAGTTTCTGA 909 0.3806 MLGRRVFNDENHGNDPKADDFKNMILEAMVLGGVFNISDFIPSLEWLDLQGVQAKTKILHKKFDAFLTNIIEEHETSNSKSEKHKDLLTTLLALRDEGDDEGNKLTNIEIKALLLNMFVAGTDTSSSRDRNVKEEDIQNLPYLHAVIKETFRLHPSTPLSLPRIASESCEIFGYHIPKGATVLINVWAIARDPKQWDDPLVFKPERFLQGSDKCDVDIKGNNFEVIPFGAGRRICVGMSLGLRTVQLLTATLAHSFNWELENGLKPENMNMNEAFGLTLQRAVPLSVYPKCRLSPNMYSSSF 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00552 302 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 14 127 - -
Vifa2g00552 302 PRINTS P450 superfamily signature 226 235 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00552 302 PRINTS P450 superfamily signature 235 246 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00552 302 PRINTS P450 superfamily signature 145 156 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00552 302 SUPERFAMILY Cytochrome P450 3 292 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00552 302 Gene3D Cytochrome P450 1 127 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00552 302 Pfam Cytochrome P450 129 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00552 302 Pfam Cytochrome P450 8 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00552 302 PRINTS E-class P450 group I signature 109 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00552 302 PRINTS E-class P450 group I signature 235 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00552 302 PRINTS E-class P450 group I signature 225 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00552 302 PRINTS E-class P450 group I signature 144 162 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00552 302 PRINTS E-class P450 group I signature 185 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00552 302 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 228 237 IPR017972 GO:0005506|GO:0016705
Vifa2g00552 302 Gene3D Cytochrome P450 128 294 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00552 Vifa-Chr2 109755272 109756837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00552 1 299 Cytochrome P450 AT5G07990 60.061 5.83e-140 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00552 K05280 - gmx:547475 456.062