Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00533 ATGGCTGCAAAGTTGCTGCATTCCTTAGCAGATGATAACCAAGATCTGCAGAAGCAGATTGGTTGTATGACTGGAATTTTTCAGCTCTTCGATCGTCATCAGATACTCACGGCGCGACAGAAGAGACTTCCTTCTGGTAATTCTCATTTCAGTGATGGAAGCTTGGAAAGAGATTCTGATAGCAATCATAGTCTACAACATCGACAAAACCCAAACGATATGAGCTTAAACACGGGTTTGAATGAAAAGCGAAGAGTTTCGACAGAGTCATCGAGAGCATCATTCTCGTCTTGTTCATCATCGTTGTCCTCTTTGGACTTTAAGGCTGAAGTAGAGACTTCCTTTGAAACTCCTTCAAGGGACACATTTATGAACCAGCCATCTATCTCTCCCCGTTTCGGACGTCACTCACTTGACCTACGTGATGTCGTGAAGGACTCAATGTATCGGGATCCTCGAGGGCCGTCTTCAAAATCTACAGCGAAAGAGCAATCTTCTGTTCATGCCATGAAGCATAGGGATTCACCGCGACCTTTTCAGCATTCGAAATATGTTGATAGATCTTATGGAGTTGAGATAGACGAGAAGCAAAGTGTGCCTATTGATCTAAAGGAGTCTATTCGTGTCCTTTCAAAACTTCGAGAAGCACCTTGGCACTATGGAGAAACTACTAGGGAACTTCCGAGATCGTTGCATGATGTAAAAGATGGACACTGGAATTCCGTCTCGAAGGATGCTCCTTGGTTGGCTTATGATGGAAGAGAAATGAGTCGTTTATCTTTTGAATCTCGAGAGACGATCAAATCCACACCAAAGATAAAAGAATTTCCTCGGCATTCACTTGATAGCAAGGAAGGTTCGTGGCGCACTTATAACTCTGATTTGAAGCCTAACCACGGCTCAAGAAACGTTTACGGTGCCACCTCCACCTCCAATGAAAAATTCTCTAGTTCACAACAGTCTTCGTCAGCACAAAATCGGCTACCAAGTGTTGTTGCAAAACTTATGGGCTTGGAAGCATTACCTGATTCCTCTTCAGCCGGCGATACTCAATCAGGTTCATCTGAAACTTATTCAGCTCAAGGTAACGGTCAAATTCCAAGATCATCGAACAATGGATTCATAAGACCGCTCCGAGTTTCCAACTCGCCGAAAATGTCATCAAAAGATCCAACTTCGCCAAGGCGGAAAAATCCCGACGTCGTTATGAGACCAGTCTCTAGTTCGAAGTTTCCGATTGAACCAGCACCTTGGAAGCAACATGACGCAAATAGAAACTCTCAGAAACCAAGTTTAAGGACAGCTAAAGCTCAAGCGAGAACACCGGATTCATTTCCTTCGGTTTATAGCGAGATAGAGAAGAGATTGAAGGACCTCGAATTCAAACAATCCGGAAGGGATCTTAGAGCACTAAAGCAGATACTAGAAGCGATGCAAGAAAAGGGACTGTTAGAGAGCCGAAAAGACGAACAAGTTCCAAACCCAGGTGGAAGTCGAGGTGACTATGAACCGAAAGCTACCAATCTAAATCACAATTCAAGGCCGGGAAAGCAACAAAATCATCAGAGAATCAATTTTCTATCGTCTGCAATAAAGGGAAGTGACTCAGCAAGAGCTTTTGATTCTCCGATAGTGATAATGAAACCGGCAAAGTTCGTTGAGAAATCCGAGATCTCGGCTTCTTCAGCTATTCCAATTGGCGGTTTTTCTGCTTCCCATAATAGAAACAACATATCTTCTACTCTAAAAGATCAGTCTCCGAAGAATATTCGCAGGGATGCTTCTCTGAGTTCCATCGAAAAGAAAACAAGCATTACCAAGACTACTAGATCATCATCACAATCTCAGTCAAGGTCTCACCAATTCCCAAGAGAAAATATCCTAAGTCCAGTGAAGAATTCAGGTGCTGTGAGTCCGAGATTGCAGCAGAAGAAGTTGGAGTTAGAGAAGCGATCTCGTATACCTACTTCACCGTCAGATGCAAACAGATCAAGAAGACAATCTGGTAAAATGGCTACGGAATCGATTTCCCCGGGTGGAAAAGTACGACAGAAAGACAAAGTCGTCAACTCACAGCATAGTGAAGAGCAAATGAGTGAACTAAGCAATGATTCTCGGAATTTTTACCAAGGGGATGAAATTTCTCTTCCATCAGATAGCATCACCGTCGACTCAAAATTGGATATTGAAGTCACTAGTAGTTTAAGGACTAACGTAACCGATGGCAGCCAAAGTCCGTTCTTGAAAGCTATGAAGCAATTGGTTTCAGAAACAGTTCAGAAAAAATCAACTCCAATGTTGGATGAAGATGATACAATTCAAGAACTTTCAACTAAGGCTCTGGAACATCCAAGTCCTAACTCGGTTCTTGATGGATCTGTGTACATAGACGATGCGGCATCACCAGTAATGCAGATACCTAAAGATCCAAAAGCTGGTAATGATCAAGAATCCAAAGACAATGATGTCAAAGATCAATGGAAGCCCGATGACAGCCTTTCATTTAACAGCACGGGATCCGGAGAGATCAATCGCAAGAAATTACAAAGCATAGATCACCTCGTTCAGAAGCTTAGACGGCTAAACTCAAGCCACGACGAAGCTAGAAACGATTACATTGCTTCACTATGCGAAAACTCAAATCCAGACCACCGATACATATCTGAAATACTACTAGCCTCCGGCCTCTTACTCAGAGACCTGAGTTCCGAATTTCTAACATTTCAACTACACTCATCGGGTCATCCTATCAACCCAGAGTTATTCCTTGTCTTGGAACAAACCAAAGCAAGTAGCTTGCTTTCAAAAGAAGAAACCACCTTAGAAAAATCCGCTTTCTCAAAGCAAAACACCGAGAAATTCCACCGAAAACTCATCTTTGATTCCGTGAACGAAATCCTCGGTGCAAAACTAGGCTATTCTTCCGAACCATGGTTTCAACTCAACAAACTCACAAAGAAGAACCTCAGTTCTCAAAAGCTTCTCAAAGAACTATGCTTCGAGATAGAAAAAGTCCAAGCCAAGAAAACAGAAACCTGCCCAGAAGACGACGAAGAGGACGACGGTCTCAAGAGTTTGTTGTGCGAAGATGTGATTCATGGATCAGAATGTTGGGAAAACTTCAATGGTGAAATACCTGGGGTTGTGTTGGATGTTGAGAGATTGATATTCAAGGATTTGGTGAATGATATTGTGATTGGTGAAGCTGCTGGCTTGCGAGTCAAGTCATCGGTTCGGCGCAGGAAACTGTTTGGAAAGTAG 3261 0.4284 MAAKLLHSLADDNQDLQKQIGCMTGIFQLFDRHQILTARQKRLPSGNSHFSDGSLERDSDSNHSLQHRQNPNDMSLNTGLNEKRRVSTESSRASFSSCSSSLSSLDFKAEVETSFETPSRDTFMNQPSISPRFGRHSLDLRDVVKDSMYRDPRGPSSKSTAKEQSSVHAMKHRDSPRPFQHSKYVDRSYGVEIDEKQSVPIDLKESIRVLSKLREAPWHYGETTRELPRSLHDVKDGHWNSVSKDAPWLAYDGREMSRLSFESRETIKSTPKIKEFPRHSLDSKEGSWRTYNSDLKPNHGSRNVYGATSTSNEKFSSSQQSSSAQNRLPSVVAKLMGLEALPDSSSAGDTQSGSSETYSAQGNGQIPRSSNNGFIRPLRVSNSPKMSSKDPTSPRRKNPDVVMRPVSSSKFPIEPAPWKQHDANRNSQKPSLRTAKAQARTPDSFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRKDEQVPNPGGSRGDYEPKATNLNHNSRPGKQQNHQRINFLSSAIKGSDSARAFDSPIVIMKPAKFVEKSEISASSAIPIGGFSASHNRNNISSTLKDQSPKNIRRDASLSSIEKKTSITKTTRSSSQSQSRSHQFPRENILSPVKNSGAVSPRLQQKKLELEKRSRIPTSPSDANRSRRQSGKMATESISPGGKVRQKDKVVNSQHSEEQMSELSNDSRNFYQGDEISLPSDSITVDSKLDIEVTSSLRTNVTDGSQSPFLKAMKQLVSETVQKKSTPMLDEDDTIQELSTKALEHPSPNSVLDGSVYIDDAASPVMQIPKDPKAGNDQESKDNDVKDQWKPDDSLSFNSTGSGEINRKKLQSIDHLVQKLRRLNSSHDEARNDYIASLCENSNPDHRYISEILLASGLLLRDLSSEFLTFQLHSSGHPINPELFLVLEQTKASSLLSKEETTLEKSAFSKQNTEKFHRKLIFDSVNEILGAKLGYSSEPWFQLNKLTKKNLSSQKLLKELCFEIEKVQAKKTETCPEDDEEDDGLKSLLCEDVIHGSECWENFNGEIPGVVLDVERLIFKDLVNDIVIGEAAGLRVKSSVRRRKLFGK 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 115 132 - -
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 147 181 - -
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 568 717 - -
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 657 674 - -
Vifa2g00533 1086 PANTHER LONGIFOLIA PROTEIN 1 1084 IPR033334 GO:0051513
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 804 841 - -
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 568 585 - -
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 421 445 - -
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 165 181 - -
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 599 640 - -
Vifa2g00533 1086 Coils Coil 851 871 - -
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 344 389 - -
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 812 829 - -
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 40 99 - -
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 694 717 - -
Vifa2g00533 1086 Pfam Domain of unknown function (DUF4378) 883 1063 IPR025486 -
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 342 445 - -
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 115 134 - -
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 286 326 - -
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 65 99 - -
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 482 521 - -
Vifa2g00533 1086 Pfam DUF761-associated sequence motif 316 346 IPR032795 -
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 505 521 - -
Vifa2g00533 1086 MobiDBLite consensus disorder prediction 272 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00533 Vifa-Chr2 99101222 99105620 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00533 133 1085 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 44.873 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00533 - - gmx:100787391 1428.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00533 2 99101222 99105620 Vifa2g00533 2 99101222 99105620 ECH
Vifa2g00533 2 99101222 99105620 Vifa2g00533 2 99101222 99105620 PCT