Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00455 ATGGCTTTTCGCTTGCCAATGGCAGTGTCACCTCTTCTATGTGGTGACAAGCTAGCCAATCTCATTGTTGGAGTAGCTAAAAACTTTTCTCTATTTATGGTCATGGTGGTTTTGTGCAATGGTTTGCATTTCTTTCTTAAGTCGTATTCGCAACCTCGAATCACTTCTGATATAATCGTAGGAGTAATCGTTGGAAACATCGGATTTGTACGTACTTTATTCCAGAAATTCAACTTGACGTTTGGATTCATAATCGATTTCGGGATGATGGCTTATATGTTTGCATTAGGGATAGAAATGGATCCGTATATTCTGTTACAGAAACCAACAAGATATGTTAGGGTTGCGTGGTCGGGAGTTGGCATAACATTCTTATTAGCGATTATGATATCTCCTTTGGTGAAGTACTTTCCAAACGTTGAAAAAGTGATAGAATTCTCGCTAGCTTTCTCGATCCTAATGGCGAGCACGGATTCGCCTGTGTTGACGCGTTTAATAACACAGCTAAAAATCGGAAAATCAGATATCGGGAAGCTTGTAATCGCGTCTGCAATGCACTCGGGTTTCATGTGCTATTGCATGCTTTCAATTTGTTTCATACTTGCTCCACTGCCTGATATTTGCAGTGATTTGCACCTTGGTTTTGATTCTAAAAAAGGGATGAGAATGGGTTTCGCGGTCTTGGGAGAAGTCCTATTCACATTAGTAGTTTCGCCGATTTTCATGAGTTGGGTTAATAATGAAAATCCAGATGGTAGACCTATGAAAGGTCCGCATTTGATACTTTCCATTGCGTTTGTCGTGTTAATGTGTTCTTCATCCGTTTTAGCTGGTTTTACACCGATTTTAAGTGCTTTTATCGTTGGTGTTTGTTTTCCTAAGGAGGCTGATTTGAGGCAGTTTGAAGCAAGAAATATTAACACATGGGTAAAAATACTTATGCTTAATGTTATGTCAATAGTCGGACAAATATCGGGAGCACTTCTTTCGGGGGCAATACAGGGATTTCACTGGCCGGAAGCAACTTCAATAGGATTGCTTCTTACTGCAAAGGGTCATTTGCATATCTACTTGGTTGTCAAAGTGATGCGTTGTGGCGATGCAACAACTGTGTCAACAGGCATTGGGATGATATTTGCAATCCTTTTCACGGTTTTATACTTGCCGTCGGTTGTAGCACTTATCATAAAACGTGCAAAGAAAAGGTCGCCTACTCATCGCTTAGCGCTTCAATCACTCGATCCATCGAGCGAACTACGGATCCTATTATGTGTTCATGGACCTGAAAATGTTCCTGCGTCTATAAGCTTTCTGGAGATTACAAAAGGCGGAGCTGATCCAGGTATTCTAGTGTATGTCGCTGACATGATCGAACTAACGAACGAAATAACAGTATTTTTAGAGAAGGATGAAGGAGTCCACACAGCGACTGTGAAAGACAAAGAAGTAATGGAAATGAGGGAGCAAATAACCAACGCGTTTCAAGCACATGTTTCAGATAGGAATGAAGGTATTACATTGAAAAGAACCATGGCGTTATCGACGATTAATAATATGCCACAAGAGATTTGTGTTTTAGCAGAGGACTTGATGGTTGCTCTTGTCATATTACCGTTCCATCGGCTTCAACGTCAGGATCGAACATTGGATGGTGGTAATCAAGGTTTCAGATATGTTAATCGAAAGGTACTAAGAAGTGCGCCTTGTTCTGTTGGGATTCTAGTCGATAGAGGATTTGGATCGTTAGAACGTTTAACAACATGTCAAGCATCGGAAAGCGTGGCAGTAATATTCATAGGTGGGAAAGATGATAGAGAAGCACTTGCCTATGTGAGCCGTGTCGCGCGACATCCAGGAGTAAATCTGACTGTAATAAGATTCCTAGTAGATACAACAGCAGAGTCGTCGAGATTAGTTGGATACAGAATCATCCTCCCGGATCAAGAGCAGGAAATGCAGTTGGACGATGAATGTTTTGCAGAATTCTACGAGAAGCATGTGATTGGAGGAAGAATTGCGTATACGGAGAAACATCTCGCGAATGCTTCTGAGACATTCTCTATTCTCAAATCATTTGAAGGGCAATACTCGTTAGTTATTGTAGGAAGAGAAGGAGGGGTGAACTCGATTTTAACAAGAGGGATGAATGATTGGCAACAGTGTCCTGAACTTGGACCTATAGGTGATGTTCTTTCGGGACCGGATTTTGCAGTGACGGTTTCGGTTTTGATCATCCAACAACACAGACTTAAAGGAGAAATAGATGGCTTAGATGAAGATTTTTCTGTCATGTCATACAATAAAAACGGTAGTATTAGAGATTAG 2325 0.4099 MAFRLPMAVSPLLCGDKLANLIVGVAKNFSLFMVMVVLCNGLHFFLKSYSQPRITSDIIVGVIVGNIGFVRTLFQKFNLTFGFIIDFGMMAYMFALGIEMDPYILLQKPTRYVRVAWSGVGITFLLAIMISPLVKYFPNVEKVIEFSLAFSILMASTDSPVLTRLITQLKIGKSDIGKLVIASAMHSGFMCYCMLSICFILAPLPDICSDLHLGFDSKKGMRMGFAVLGEVLFTLVVSPIFMSWVNNENPDGRPMKGPHLILSIAFVVLMCSSSVLAGFTPILSAFIVGVCFPKEADLRQFEARNINTWVKILMLNVMSIVGQISGALLSGAIQGFHWPEATSIGLLLTAKGHLHIYLVVKVMRCGDATTVSTGIGMIFAILFTVLYLPSVVALIIKRAKKRSPTHRLALQSLDPSSELRILLCVHGPENVPASISFLEITKGGADPGILVYVADMIELTNEITVFLEKDEGVHTATVKDKEVMEMREQITNAFQAHVSDRNEGITLKRTMALSTINNMPQEICVLAEDLMVALVILPFHRLQRQDRTLDGGNQGFRYVNRKVLRSAPCSVGILVDRGFGSLERLTTCQASESVAVIFIGGKDDREALAYVSRVARHPGVNLTVIRFLVDTTAESSRLVGYRIILPDQEQEMQLDDECFAEFYEKHVIGGRIAYTEKHLANASETFSILKSFEGQYSLVIVGREGGVNSILTRGMNDWQQCPELGPIGDVLSGPDFAVTVSVLIIQQHRLKGEIDGLDEDFSVMSYNKNGSIRD 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00455 774 Gene3D - 440 717 - -
Vifa2g00455 774 PANTHER CATION/H + ANTIPORTER 34 749 - -
Vifa2g00455 774 Gene3D - 27 405 IPR038770 -
Vifa2g00455 774 Pfam Sodium/hydrogen exchanger family 33 296 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00455 Vifa-Chr2 77664834 77667474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00455 13 764 Antiporter Super Family AT3G52080 44.806 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00455 K26731 - gmx:100786469 1024.23