Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00452 ATGCAGTTGTCACTTGAGAACATTGGAAAACTTTTCTTAGGCAAGGAGCCAGGCCTATTTCTAAATTCATTGGATAAACTCTATCAAGGTGTGCTTCCAGGTGTGAGAGCTTATCCAATTAATATTCCTGGTTTTACATACCACTATGCTCTTCAGTGTAGAAGAAAACTCGATGATATTTTTTGGATGGAGTTAAATAAGAGAAAATCAAAGAATAAAAATAAGGTGGAAACAATTGATTTAATGGACGGGTTAATGCAAATTGAAGACGATGATGGTGACAAATTAAGTGATAAAGAAGTTGCAGACAACATTGTCTCTCTTGTCTTGGGTGGATATATCTCTACTTCTCTTGTATCCATGTGGGCTATTTACCTTCTTGCCAAGTATCCAAATGTGCTAAAATTGCTAAGGGAAGAAAACATGGCTTTCACAGAGGGAAATTCAGGAGATTTTATTACAGCTAAAGATGTTTCAAATTTAAAATATACAAACAAGGTTGTTGAAGAAGTGATAAGAATGTCCAATGTTGCAGCTTTTGTTTTCAGAAAAGTTGTAAATGAAGTTGATTATAAAGGTTATAAGATACCAAAGGGATGGAAAGTAATTTCTATGCTTCGTTATATTCATACAGATCCAGAAAACTTTAAGGATCCCATGTATTTTGACCCTGATAGATGGAATGAGTTGGCAAAACCTGGAACATATCAAGTTTTTGGTGCTGGACAAAGACTCTGCCCTGGAAACATGCTAGCAAGAATTCAACTAGCACTTCTGCTTCATCATTTGTCCATAGGATACAAGTGGGAGCTGGTTAATCCAAATGCAAATATAATTTATCTTTCACATCCTGCTCCTATGGATGGGGTTGAGGTCAAGTTCAGCCAATTGTGA 894 0.3602 MQLSLENIGKLFLGKEPGLFLNSLDKLYQGVLPGVRAYPINIPGFTYHYALQCRRKLDDIFWMELNKRKSKNKNKVETIDLMDGLMQIEDDDGDKLSDKEVADNIVSLVLGGYISTSLVSMWAIYLLAKYPNVLKLLREENMAFTEGNSGDFITAKDVSNLKYTNKVVEEVIRMSNVAAFVFRKVVNEVDYKGYKIPKGWKVISMLRYIHTDPENFKDPMYFDPDRWNELAKPGTYQVFGAGQRLCPGNMLARIQLALLLHHLSIGYKWELVNPNANIIYLSHPAPMDGVEVKFSQL 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00452 297 PRINTS P450 superfamily signature 111 128 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00452 297 PRINTS P450 superfamily signature 246 257 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00452 297 PRINTS P450 superfamily signature 166 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00452 297 PRINTS P450 superfamily signature 237 246 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00452 297 SUPERFAMILY Cytochrome P450 3 294 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00452 297 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 239 248 IPR017972 GO:0005506|GO:0016705
Vifa2g00452 297 PRINTS E-class P450 group I signature 100 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00452 297 PRINTS E-class P450 group I signature 236 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00452 297 PRINTS E-class P450 group I signature 165 183 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00452 297 PRINTS E-class P450 group I signature 120 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00452 297 PRINTS E-class P450 group I signature 246 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00452 297 PRINTS E-class P450 group I signature 205 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00452 297 PANTHER CYTOCHROME P450 26 2 282 - -
Vifa2g00452 297 Pfam Cytochrome P450 50 271 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00452 297 Gene3D Cytochrome P450 1 297 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00452 Vifa-Chr2 77614100 77621150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00452 2 296 Cytochrome P450 AT2G32440 33.779 2.34e-62 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00452 - - tpra:123916160 500.36