Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00431 ATGCCGGCTTTACATTTGAGTTACCAATATCTTCCATCTCATTTGAAAAGATGTTTTGCATATTGTTCAATTTTTCCAAAGGACTATCCACTTGATAGGAAGACATTGATTTTGTTGTGGATGGCAGAGGGCTTCCTTGACTATTCTCACGGGGGAAAATTGGTAGAGGAAGTAGGTGATGATTGCTTTTCTGAATTGTTGTCTAGATCCTTAATTCAACAATCAAATGATGGTGCTCGTGGGAAATTGTTTTACATGCATGACCTTATCAACGATTTAGTTACATCAGTATCTGGAAAAATTTGTCGTCGGTCTGAATTTGGTGACATCCCTGAAAACGTTCGTCATTTATCATATATTCAAGAAGAGTATGATATTTTCGTGAAGTTTAGGCCTTTCTACAATTATAAATGCTTGCGAAGCTTCCTGCCCACTACTTATTCTAGGAGGTGGTCACACAATTTCTTATCCGTCAAGGTGGTTGATGATCTGCTACCACTATTCAAAAGGTTACGCGTGTTATCGCTATCAAAGTATACAAACATCACTAAGTTACCAGATTCAATTGGCAATTTAGTGCAGCTGCGGTATCTAGATCTTTCACACACTAAAATCAAATGTTTGCCTGATACAGTATGTAACCTTTACAATTTGCAAACTTTGAATTTATTATGTTGCTACAATCTCACTGAATTGCCAGTGCATATGGGAAATTTAATCAGTTTACGTCACCTTGATATAAGTGGGACTGACATAAAAGAGTTGCCTATGGAAATTGGTGGACTAGAAAACCTCCAAACTTTGACTGGTTTTTTAGTGGGAAAGCGACATGAAGGGTTAAGTATCAAAGAGCTAAAGAAATTCCCAAACCTACAAGGAAAATTTACCATAAAAAACCTACACAATGTTGTTGATGCAAAAGAGGCAGAAGAAGCCAACCTGAAAAACAAAGAGAAAATTGAGAAGTTAGAGTTGACATGGGAAAACAAAGTGAAGATTCACTACAAGTGA 1011 0.368 MPALHLSYQYLPSHLKRCFAYCSIFPKDYPLDRKTLILLWMAEGFLDYSHGGKLVEEVGDDCFSELLSRSLIQQSNDGARGKLFYMHDLINDLVTSVSGKICRRSEFGDIPENVRHLSYIQEEYDIFVKFRPFYNYKCLRSFLPTTYSRRWSHNFLSVKVVDDLLPLFKRLRVLSLSKYTNITKLPDSIGNLVQLRYLDLSHTKIKCLPDTVCNLYNLQTLNLLCCYNLTELPVHMGNLISLRHLDISGTDIKELPMEIGGLENLQTLTGFLVGKRHEGLSIKELKKFPNLQGKFTIKNLHNVVDAKEAEEANLKNKEKIEKLELTWENKVKIHYK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00431 336 Coils Coil 297 326 - -
Vifa2g00431 336 Gene3D Ribonuclease Inhibitor 139 334 IPR032675 -
Vifa2g00431 336 PANTHER DISEASE RESISTANCE PROTEIN RP 1 328 IPR044974 GO:0006952
Vifa2g00431 336 FunFam Probable disease resistance protein At1g63360 8 96 - -
Vifa2g00431 336 Gene3D - 2 97 IPR036388 -
Vifa2g00431 336 SMART LRR_typ_2 192 215 IPR003591 -
Vifa2g00431 336 SMART LRR_typ_2 239 262 IPR003591 -
Vifa2g00431 336 SUPERFAMILY L domain-like 86 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00431 Vifa-Chr2 72292565 72293575 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00431 180 268 WRKY Transcription Factor Family AT4G12020 44.444 7.07e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00431 - - tpra:123915821 479.944