Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00386 ATGGCAAACAAATATGAGGGATGTGCTGTAGGAATAGACCTTGGAACAACATACTCTTGTGTTGCAGTGTGGGTTGAAGAACACAATAGAGTTGAAATCATACACAATGACCAAGGCAACAAGACCACTCCTTCTTTTGTTGCTTTTACTGATGAACAAAGGTTGATCGGTGATGCTGCTAAAAACCAGGCTTCCACCAACCCAGAAAACACTGCCATTGACTTCTCTTCACCAATCACCCGTGCCAAGTTTGAGGAAATCAACATGGATCTTTTCATCGAGTGCATGGAGACAGTTGAGAGGTGTCTAGTTGATGCTGGGATGGACAAGAGTAGTGTAGATGATGTTGTCCTTGTTGGTGGATCTTCAAGGATTCCTAAACTGAGACAACTATTGCAAGACTTTTTTAAGGGGAAAGAACTATGCAAAAGCATCAATCCTGATGAGGCTGTTGCTTATGGGGTTGCTGTCCAGGCTGCATTCTTGACTGAAGGTGTTAGTAATGTTCCAAATTTGGAGCTGATGGATGTCACACCTCTGTCTTTAGGTTGGGGCCTAAAAAATGATGTCATGAGTGTGGTGATTCCTAGGAACACTTTGGTTCCTGTCAAGAACACACTGTCATATGTTACGGTTATCGATAATCAATCTGATGTCCTTATTGTGGTTTACGAGGGCGAGAGAACCAGAGCCAGTGACAACAACCTGCTTGGTTTTTTCCATCTTTTGGGCTTACCACCTGCTCCTCGCGGCTATCCTTTTAAGGTATGCTTTGATATAGATCAAAATGGTATTCTAACTGTTTCTGCTATGGAAAAATCCACTGGCAGTACTAATGAGATTACAATAACCAACAACAAAGAAAGGTTGTCAAACGATGAAATGAAGAGAATGATCCGCGAAGCTGAGGAGTATGGCGTTGAAGATAAAAGTTCTTAA 939 0.4207 MANKYEGCAVGIDLGTTYSCVAVWVEEHNRVEIIHNDQGNKTTPSFVAFTDEQRLIGDAAKNQASTNPENTAIDFSSPITRAKFEEINMDLFIECMETVERCLVDAGMDKSSVDDVVLVGGSSRIPKLRQLLQDFFKGKELCKSINPDEAVAYGVAVQAAFLTEGVSNVPNLELMDVTPLSLGWGLKNDVMSVVIPRNTLVPVKNTLSYVTVIDNQSDVLIVVYEGERTRASDNNLLGFFHLLGLPPAPRGYPFKVCFDIDQNGILTVSAMEKSTGSTNEITITNNKERLSNDEMKRMIREAEEYGVEDKSS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00386 312 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vifa2g00386 312 SUPERFAMILY Actin-like ATPase domain 12 162 IPR043129 -
Vifa2g00386 312 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 163 312 IPR029047 -
Vifa2g00386 312 Gene3D - 10 72 - -
Vifa2g00386 312 PRINTS 70kDa heat shock protein signature 8 21 - -
Vifa2g00386 312 PRINTS 70kDa heat shock protein signature 60 68 - -
Vifa2g00386 312 PRINTS 70kDa heat shock protein signature 38 50 - -
Vifa2g00386 312 FunFam heat shock 70 kDa protein-like 3 121 - -
Vifa2g00386 312 Gene3D Actin; Chain A, domain 4 75 94 - -
Vifa2g00386 312 FunFam Heat shock 70 kDa protein 166 312 - -
Vifa2g00386 312 ProSitePatterns Heat shock hsp70 proteins family signature 3. 116 130 IPR018181 -
Vifa2g00386 312 PANTHER HEAT SHOCK PROTEIN 70KDA 9 70 IPR013126 GO:0005524|GO:0140662
Vifa2g00386 312 Pfam Hsp70 protein 74 311 IPR013126 GO:0005524|GO:0140662
Vifa2g00386 312 Gene3D - 95 142 - -
Vifa2g00386 312 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 168 310 IPR029047 -
Vifa2g00386 312 Gene3D - 143 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00386 Vifa-Chr2 58736829 58737861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00386 1 81 Calmodulin-binding Proteins AT1G56410 69.136 8.32e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00386 K03283 - gmx:102667572 339.347