Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00325 ATGGTTCAAAGAAAGGTCCCAAACAATCTTAGTATCCAAACACAACATGTTAAATTTGACAAATTTCCCACAAACATGAAACTATCTTCTTCATCTTCTCATCAACAAAACCAAGATGATAAAAGTAAACTTTCTAAGAAAATGAAGAAATCAAACTCAATCAAACTCTCTCATCTTGAGACTCTTCAACTTCAATCAACACCAATTTCAACAAAAACAACAACAACAACAACAACAAAAGATGGTTCACCAAATTACATGAAGCACACAAGTAGTTCACAATCAAAAAAGGAACTTTTTCATGTAAGTCTTAGAAAAACTCAATCTTGTTCTGTTTCTAAGAATCTTGATACAAAATTTTCTAGTGATTATTCATGTAAAAAACCTAGTTTGAGTTTGGTTAGAACATTAACAAAAACTACTAGTTTTAAGGGTTCTAGAAATTCTCCTAGAAAATCAACAAGGGCTACTTGTTCTTCCACTTTGAAAGACTCAAACTTTCCATCATATCTTGAGCTTAATCATGGTGGAACTGAGTTAGAGGGAAGTTCAGTTATGAGGGTTTGTTCATATAGTTATTGTTCTCTTAATGGACATCATCATCATCATGGTGATAATTTGCCTCCTTTGAAGACTTTTGTGTCTTCGAGAAGGCGCGTATTGAAGCGTGTGAAGCTCGAAGCGCTGAGTCCTCGAAATCGGAGATTGAAGACGACGTGTGAGGTAGGAAAGAAGGACTGTGATGTTGAGCGGTATGTGTTTGATGAAAAACCTGAATGTGAAGAAATTGGCATGGATTTCTTCATTGAAATTTATGCTAGTGGAAAAAAAGATGAGAAACCGATAGGAGAAGAAGAAATTGGAAAAATCGATTTTCTGGAAGAGGTTGAGGGTTATGAAGATATCATCAAGTCTACAATTGAAGATGATGGCATAGAAGCAGATTTTCTGAAAGAGGTTAAGGATCAAGAGAAACATGAAGATGCAGATGCAGATGAAGAAGAACAATCTAGTTGGTCTCATGAAGAAATGAGTATGGAAGATGTTCACAATAATTTGGATGATTCTGATTCCGAACGGTCCTATGGATTTGAGCAAGAACATGATGCTAATTCTTCTGTTTACGCGGATGAGGAAAATGACTCGAAAGATGAATCTTTATCTCAGAGTTCTCATGATGTATCGGTGACATGGTTAGACGATATCATTAGCTGCTATTACGATGACATTATTTTGCTTGATGAAACACTCAAAGAATCCAAATCCGAAGAAATCATCTATCTTGAAGAACAACCTAATGATGGCATGATTAGTTTTGTCCTTGATGACAAAATTGGATGCAACGAGACTCAAGAAATCGATGACCCTACCAGTGACATTGGTTGTGACCGATCTTCTTTGGCAGATGAAATATTTGATTACCTAATAAATTCCGAAGAGAAAGTTGATGAGACTAGTCAAGAGAACAAATATTTCAAGAGAGGGGAGAAGAACCAAATTCAACTGTCTCCGAATGAATTTGAACTTTGTCCCTTGAAGCAAACGATCACAGACCAAACTCTTACCGCTGACGTGATAACTCGTGGACAGGACGACCATATTCCGTTAGTCGATGTTGTTGAAGAAAGCATAAAAAATATTCAAAATCAAGGCAAAGGTAATAAAAGATCAAGTTGCGTAGTCGATGAAGAGGAAAACGCAAGAGAGGATTGGAAAGGTGTGATTAGAAGAAAGAGGTGTGTTGACGACGATGATGAAGAGACGAGGAAGTTCAATCCAAGAGATCCAAATTTCCTTCCATTGGTTCCTGAAAAAGAAAAAGAAAAAGTCGATTTGAGGCATCAAATGATGGATGAGAGAAAGAATGCGGAGGATTGGATGGTTGATTGTGCACTAAGGCAAGTTGTTAACAAGCTTGCTCCTGCTAGGAAGAAGAAGGTTGCATTACACATTCAAGCTTGCAGCTGA 1968 0.3689 MVQRKVPNNLSIQTQHVKFDKFPTNMKLSSSSSHQQNQDDKSKLSKKMKKSNSIKLSHLETLQLQSTPISTKTTTTTTTKDGSPNYMKHTSSSQSKKELFHVSLRKTQSCSVSKNLDTKFSSDYSCKKPSLSLVRTLTKTTSFKGSRNSPRKSTRATCSSTLKDSNFPSYLELNHGGTELEGSSVMRVCSYSYCSLNGHHHHHGDNLPPLKTFVSSRRRVLKRVKLEALSPRNRRLKTTCEVGKKDCDVERYVFDEKPECEEIGMDFFIEIYASGKKDEKPIGEEEIGKIDFLEEVEGYEDIIKSTIEDDGIEADFLKEVKDQEKHEDADADEEEQSSWSHEEMSMEDVHNNLDDSDSERSYGFEQEHDANSSVYADEENDSKDESLSQSSHDVSVTWLDDIISCYYDDIILLDETLKESKSEEIIYLEEQPNDGMISFVLDDKIGCNETQEIDDPTSDIGCDRSSLADEIFDYLINSEEKVDETSQENKYFKRGEKNQIQLSPNEFELCPLKQTITDQTLTADVITRGQDDHIPLVDVVEESIKNIQNQGKGNKRSSCVVDEEENAREDWKGVIRRKRCVDDDDEETRKFNPRDPNFLPLVPEKEKEKVDLRHQMMDERKNAEDWMVDCALRQVVNKLAPARKKKVALHIQACS 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00325 655 SMART CaM_binding_2 548 655 IPR012417 GO:0005516
Vifa2g00325 655 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 653 IPR044681 GO:0005516
Vifa2g00325 655 Pfam Plant calmodulin-binding domain 556 653 IPR012417 GO:0005516
Vifa2g00325 655 MobiDBLite consensus disorder prediction 338 388 - -
Vifa2g00325 655 MobiDBLite consensus disorder prediction 24 98 - -
Vifa2g00325 655 MobiDBLite consensus disorder prediction 24 38 - -
Vifa2g00325 655 MobiDBLite consensus disorder prediction 55 98 - -
Vifa2g00325 655 MobiDBLite consensus disorder prediction 322 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00325 Vifa-Chr2 51738900 51740949 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00325 514 653 Calmodulin-binding Proteins AT2G38800 42.143 3.88e-22 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00325 - - tpra:123913208 845.884