Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g00322 | ATGGCACTACCTTCTTCTTGTGATTGGACTCATGATGTCTTTCTAAGCTTTAGAGGCACTGATACACGAAACAACTTTACTGGTAATCTCTTCAATTCTCTCCATCAAAGAGGTATAAACACTTTCTTTGATGAACACAAAATTCATAAAGGAGATGAAATCACACCTACTCTTCTCCAAGCCATTGAACACTCCAGAATTTTCATTGCTGTTTTCTCCAATGACTACGCATCTTCAACTTTCTGTTTGACTGAACTTGTCACCATTCTTGAGTCCGCCAAGTCACATGAAAGGTTGTTTTTTCCTATTTTTTATGATGTGGATCCTTCCCACATTCGACACCTAACTGGAACTTATGGTGAAGCTTTAGAAAGACACGAAAAGAGGTTTATAAATGACAAGGATAAGGTGCAGAAATGGAGGGATGCTTTGCGTCAAGCTGCTAATGTTTCCGGATGCCATTTCAAACCAGGGTCTGAATCAGAATATAAGTTTATTGGGAAGATAGTTGATGAGATCTCTATAAAAATCAACCGTGTCCATTTGCATGTTGCAAGCAAACCTGTTGGGTTGGAGTCTCAAATGTTAAAAGTTACATCTCTCCTTGAATCTAATGAGAGAGTCGGCATGGTAGGCATTTATGGAATTGGCGGAATAGGAAAATCAACGCTTGCTCGTGCTGTGCATAACTTGGTTGCTGATCAATTTGAAAGTGTGTGTTTTCTTGCTGACATAAGACAGCAGGAAGCTCATCATGGTCTTGCCCACCTCCAAGAAACACTACTGTCTGAAATACTCGGAGAGAAGGATATTAAAGTGGGAGATGTTTACAGAGGAATGTCAATAATTAAAAGGAGGCTCCAAAGAAAAAAAGTCCTTTTGATTCTTGATAATATTGACAGAGAGAAGCAGTTACAGGTACTTGTAGGCGAACATGATTGGTTTGGCTCCGGCAGCAAGATCATAATCACTTCAAGAGACAAGCATTTGCTGGCCACTCATGGGATTGTGAAAGTGTATGAGGTCCAACAGCTAAACAAAGAAAATGCTCTTGAATTATTTAGTTGGCATGCATTTAAAATTAAAAAAATGAATTCAAGTTATGTGGATACTGCAAAACGTGCAGTATCTTATTGTCAAGGTCTTCCCTTGGCTTTGGAGGTGATAGGTTCTCAATTGTTTGGAAAAAGTTTAGCTGTATGGAAATCCTCATTAGATATGTATGAAAAAGTCATTCATAAAGACATCCATGACATTCTGAAAGTTAGCTATGATGATTTGGAAGAAGATATAAAGGATGAGCTTATTGACAAATCCCTCAGGAAAATTGATAACAATGGTTGTGTGGGAATGCATGACTTGATTCAAGACATGGGCAGAAAAATTGTGAGGCAGGAATCAACATTGGAGCCTGGACGTCGCAGTAGATTATGGTTTAGTGATGACATTGTTCATGTTTTGGAAGAAAACAAGGGAACCGATTCAATAGAAGTCATAATCTACGACTTGCACAAATACAAAAAAGTGAAATGGTGTGGAAAAGCCTTCGGCCAAATGAAGAACTTGAAAATCCTTATAATTAGAAGTGGACGATTTTCCCAAAGTCCTCAAATTCTTCCAAATAGCTTGAAAGTGCTTGATTGGAGTGAATATCAATCATCCTCTTTGCCATCTGATTTTAATCCCAAGAATCTTGCAATACTTAACCTTCCTGAAAGTTGCCTTAAACATTTTGTATCATTCAAGAGCTTTGAGATGTTGAACTTTATAGATTTTGAAGGCTGCAAGTTCCTAACCGAGATACCTAGTTTATCTAGAGTGCCAAATTTAGGGGCACTATGTGTCGATTATTGCACAAATTTAATTAGAATTCATGAATCAGTTGGGTTTCTTGAGAGGCTTGTGTTATTAAGTGCTCAAGGATGCACTCAATTAGAATGTCTGGTTTCTTTCATCAACTTGCCATCTTTAGAGACTTTAGATCTTAGAGGTTGCTCACGTCTTGAAAGATTCCCTGAAGTAGTTGCAGTAATGGAGAATATAAAAGACGTTTATTTAGATCAGACTGCCATAAAAGAATTGCCTTTTACATTTAGAAAACTTGTTGGACTGCAACGTTTGTTCTTGAGGGGATGCTATAGAATAATCCGGCTACCAAGCTATATATCTGCCAAATGTGAGATAATTACAGCTTATGGTTGTAGAGGATTTCGATCATTCGACGATGAAGAAAAAGTAAGCCCAAAAGTGTTTGAAGATGCCATGGTTGCTCGTAATGAATATGGATGGTTTTACCTTGATATGTATTCTTGTTACACAACCTCCAACGATGTCATTGAAGTATGTATGCCTCTGCGTGATTATGAATTTGGGTTTTTAGATATGAACCGAAATCTTACGGTTAAAAAGAACAAATCATCTTTGTGGTTTTGGTTTCGAGAAAAATTACCCAGGATATGTCTAATGTGTTCAGTACAAACTGATAAGCATTTGGACAACATGATATTCATTTTCAAGTTGAAAGTACTCATCAATGGCACTGAACAATTCACTTCCCAATGTAAATATATATTTTATAAAGAAAAAGTGACAACACAAGGTTTTATGTGTGATGTACATTGCAAAGTAGGGGGTGTATTTTCTGGAAATGAGTGGAATAAGGTGGAGATTTTATGTGAGTTGAAAACTCTCACGCCATGTGATTTGGAAAGGGTGATGGCCTATCAGATTGGGACCACTACGAGTACTGCAACTTGGGATTTCAAGTTAGAAAACATAGGGGATGATTTGAGTTTTATTGACAATCCTGATTCTCCTATGACAACTGAAATAGGGTTAAATATACGATTATTCCCCTTCTATAGGTTGAGTTTTCTCCGATTGTAG | 2886 | 0.3735 | MALPSSCDWTHDVFLSFRGTDTRNNFTGNLFNSLHQRGINTFFDEHKIHKGDEITPTLLQAIEHSRIFIAVFSNDYASSTFCLTELVTILESAKSHERLFFPIFYDVDPSHIRHLTGTYGEALERHEKRFINDKDKVQKWRDALRQAANVSGCHFKPGSESEYKFIGKIVDEISIKINRVHLHVASKPVGLESQMLKVTSLLESNERVGMVGIYGIGGIGKSTLARAVHNLVADQFESVCFLADIRQQEAHHGLAHLQETLLSEILGEKDIKVGDVYRGMSIIKRRLQRKKVLLILDNIDREKQLQVLVGEHDWFGSGSKIIITSRDKHLLATHGIVKVYEVQQLNKENALELFSWHAFKIKKMNSSYVDTAKRAVSYCQGLPLALEVIGSQLFGKSLAVWKSSLDMYEKVIHKDIHDILKVSYDDLEEDIKDELIDKSLRKIDNNGCVGMHDLIQDMGRKIVRQESTLEPGRRSRLWFSDDIVHVLEENKGTDSIEVIIYDLHKYKKVKWCGKAFGQMKNLKILIIRSGRFSQSPQILPNSLKVLDWSEYQSSSLPSDFNPKNLAILNLPESCLKHFVSFKSFEMLNFIDFEGCKFLTEIPSLSRVPNLGALCVDYCTNLIRIHESVGFLERLVLLSAQGCTQLECLVSFINLPSLETLDLRGCSRLERFPEVVAVMENIKDVYLDQTAIKELPFTFRKLVGLQRLFLRGCYRIIRLPSYISAKCEIITAYGCRGFRSFDDEEKVSPKVFEDAMVARNEYGWFYLDMYSCYTTSNDVIEVCMPLRDYEFGFLDMNRNLTVKKNKSSLWFWFREKLPRICLMCSVQTDKHLDNMIFIFKLKVLINGTEQFTSQCKYIFYKEKVTTQGFMCDVHCKVGGVFSGNEWNKVEILCELKTLTPCDLERVMAYQIGTTTSTATWDFKLENIGDDLSFIDNPDSPMTTEIGLNIRLFPFYRLSFLRL | 961 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g00322 | 961 | Pfam | NB-ARC domain | 194 | 411 | IPR002182 | GO:0043531 | |
Vifa2g00322 | 961 | SMART | AAA_5 | 207 | 345 | IPR003593 | GO:0016887 | |
Vifa2g00322 | 961 | Gene3D | - | 184 | 339 | IPR027417 | - | |
Vifa2g00322 | 961 | ProSiteProfiles | TIR domain profile. | 9 | 177 | IPR000157 | GO:0007165 | |
Vifa2g00322 | 961 | Gene3D | - | 344 | 435 | IPR042197 | - | |
Vifa2g00322 | 961 | SUPERFAMILY | L domain-like | 500 | 784 | - | - | |
Vifa2g00322 | 961 | Gene3D | Ribonuclease Inhibitor | 487 | 742 | IPR032675 | - | |
Vifa2g00322 | 961 | SMART | till_3 | 10 | 150 | IPR000157 | GO:0007165 | |
Vifa2g00322 | 961 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 7 | 179 | - | - | |
Vifa2g00322 | 961 | SUPERFAMILY | "Winged helix" DNA-binding domain | 415 | 488 | IPR036390 | - | |
Vifa2g00322 | 961 | PRINTS | Disease resistance protein signature | 379 | 393 | - | - | |
Vifa2g00322 | 961 | PRINTS | Disease resistance protein signature | 210 | 225 | - | - | |
Vifa2g00322 | 961 | PRINTS | Disease resistance protein signature | 652 | 668 | - | - | |
Vifa2g00322 | 961 | PRINTS | Disease resistance protein signature | 286 | 300 | - | - | |
Vifa2g00322 | 961 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 11 | 721 | IPR044974 | GO:0006952 | |
Vifa2g00322 | 961 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 177 | 435 | IPR027417 | - | |
Vifa2g00322 | 961 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 5 | 152 | IPR035897 | - | |
Vifa2g00322 | 961 | Pfam | TIR domain | 11 | 176 | IPR000157 | GO:0007165 | |
Vifa2g00322 | 961 | Gene3D | - | 5 | 183 | IPR035897 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g00322 | Vifa-Chr2 | 51312199 | 51315763 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g00322 | 11 | 745 | WRKY Transcription Factor Family | AT4G12020 | 30.692 | 5.57e-82 | 289 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g00322 | - | - | mtr:11415136 | 1280.39 |