Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00322 ATGGCACTACCTTCTTCTTGTGATTGGACTCATGATGTCTTTCTAAGCTTTAGAGGCACTGATACACGAAACAACTTTACTGGTAATCTCTTCAATTCTCTCCATCAAAGAGGTATAAACACTTTCTTTGATGAACACAAAATTCATAAAGGAGATGAAATCACACCTACTCTTCTCCAAGCCATTGAACACTCCAGAATTTTCATTGCTGTTTTCTCCAATGACTACGCATCTTCAACTTTCTGTTTGACTGAACTTGTCACCATTCTTGAGTCCGCCAAGTCACATGAAAGGTTGTTTTTTCCTATTTTTTATGATGTGGATCCTTCCCACATTCGACACCTAACTGGAACTTATGGTGAAGCTTTAGAAAGACACGAAAAGAGGTTTATAAATGACAAGGATAAGGTGCAGAAATGGAGGGATGCTTTGCGTCAAGCTGCTAATGTTTCCGGATGCCATTTCAAACCAGGGTCTGAATCAGAATATAAGTTTATTGGGAAGATAGTTGATGAGATCTCTATAAAAATCAACCGTGTCCATTTGCATGTTGCAAGCAAACCTGTTGGGTTGGAGTCTCAAATGTTAAAAGTTACATCTCTCCTTGAATCTAATGAGAGAGTCGGCATGGTAGGCATTTATGGAATTGGCGGAATAGGAAAATCAACGCTTGCTCGTGCTGTGCATAACTTGGTTGCTGATCAATTTGAAAGTGTGTGTTTTCTTGCTGACATAAGACAGCAGGAAGCTCATCATGGTCTTGCCCACCTCCAAGAAACACTACTGTCTGAAATACTCGGAGAGAAGGATATTAAAGTGGGAGATGTTTACAGAGGAATGTCAATAATTAAAAGGAGGCTCCAAAGAAAAAAAGTCCTTTTGATTCTTGATAATATTGACAGAGAGAAGCAGTTACAGGTACTTGTAGGCGAACATGATTGGTTTGGCTCCGGCAGCAAGATCATAATCACTTCAAGAGACAAGCATTTGCTGGCCACTCATGGGATTGTGAAAGTGTATGAGGTCCAACAGCTAAACAAAGAAAATGCTCTTGAATTATTTAGTTGGCATGCATTTAAAATTAAAAAAATGAATTCAAGTTATGTGGATACTGCAAAACGTGCAGTATCTTATTGTCAAGGTCTTCCCTTGGCTTTGGAGGTGATAGGTTCTCAATTGTTTGGAAAAAGTTTAGCTGTATGGAAATCCTCATTAGATATGTATGAAAAAGTCATTCATAAAGACATCCATGACATTCTGAAAGTTAGCTATGATGATTTGGAAGAAGATATAAAGGATGAGCTTATTGACAAATCCCTCAGGAAAATTGATAACAATGGTTGTGTGGGAATGCATGACTTGATTCAAGACATGGGCAGAAAAATTGTGAGGCAGGAATCAACATTGGAGCCTGGACGTCGCAGTAGATTATGGTTTAGTGATGACATTGTTCATGTTTTGGAAGAAAACAAGGGAACCGATTCAATAGAAGTCATAATCTACGACTTGCACAAATACAAAAAAGTGAAATGGTGTGGAAAAGCCTTCGGCCAAATGAAGAACTTGAAAATCCTTATAATTAGAAGTGGACGATTTTCCCAAAGTCCTCAAATTCTTCCAAATAGCTTGAAAGTGCTTGATTGGAGTGAATATCAATCATCCTCTTTGCCATCTGATTTTAATCCCAAGAATCTTGCAATACTTAACCTTCCTGAAAGTTGCCTTAAACATTTTGTATCATTCAAGAGCTTTGAGATGTTGAACTTTATAGATTTTGAAGGCTGCAAGTTCCTAACCGAGATACCTAGTTTATCTAGAGTGCCAAATTTAGGGGCACTATGTGTCGATTATTGCACAAATTTAATTAGAATTCATGAATCAGTTGGGTTTCTTGAGAGGCTTGTGTTATTAAGTGCTCAAGGATGCACTCAATTAGAATGTCTGGTTTCTTTCATCAACTTGCCATCTTTAGAGACTTTAGATCTTAGAGGTTGCTCACGTCTTGAAAGATTCCCTGAAGTAGTTGCAGTAATGGAGAATATAAAAGACGTTTATTTAGATCAGACTGCCATAAAAGAATTGCCTTTTACATTTAGAAAACTTGTTGGACTGCAACGTTTGTTCTTGAGGGGATGCTATAGAATAATCCGGCTACCAAGCTATATATCTGCCAAATGTGAGATAATTACAGCTTATGGTTGTAGAGGATTTCGATCATTCGACGATGAAGAAAAAGTAAGCCCAAAAGTGTTTGAAGATGCCATGGTTGCTCGTAATGAATATGGATGGTTTTACCTTGATATGTATTCTTGTTACACAACCTCCAACGATGTCATTGAAGTATGTATGCCTCTGCGTGATTATGAATTTGGGTTTTTAGATATGAACCGAAATCTTACGGTTAAAAAGAACAAATCATCTTTGTGGTTTTGGTTTCGAGAAAAATTACCCAGGATATGTCTAATGTGTTCAGTACAAACTGATAAGCATTTGGACAACATGATATTCATTTTCAAGTTGAAAGTACTCATCAATGGCACTGAACAATTCACTTCCCAATGTAAATATATATTTTATAAAGAAAAAGTGACAACACAAGGTTTTATGTGTGATGTACATTGCAAAGTAGGGGGTGTATTTTCTGGAAATGAGTGGAATAAGGTGGAGATTTTATGTGAGTTGAAAACTCTCACGCCATGTGATTTGGAAAGGGTGATGGCCTATCAGATTGGGACCACTACGAGTACTGCAACTTGGGATTTCAAGTTAGAAAACATAGGGGATGATTTGAGTTTTATTGACAATCCTGATTCTCCTATGACAACTGAAATAGGGTTAAATATACGATTATTCCCCTTCTATAGGTTGAGTTTTCTCCGATTGTAG 2886 0.3735 MALPSSCDWTHDVFLSFRGTDTRNNFTGNLFNSLHQRGINTFFDEHKIHKGDEITPTLLQAIEHSRIFIAVFSNDYASSTFCLTELVTILESAKSHERLFFPIFYDVDPSHIRHLTGTYGEALERHEKRFINDKDKVQKWRDALRQAANVSGCHFKPGSESEYKFIGKIVDEISIKINRVHLHVASKPVGLESQMLKVTSLLESNERVGMVGIYGIGGIGKSTLARAVHNLVADQFESVCFLADIRQQEAHHGLAHLQETLLSEILGEKDIKVGDVYRGMSIIKRRLQRKKVLLILDNIDREKQLQVLVGEHDWFGSGSKIIITSRDKHLLATHGIVKVYEVQQLNKENALELFSWHAFKIKKMNSSYVDTAKRAVSYCQGLPLALEVIGSQLFGKSLAVWKSSLDMYEKVIHKDIHDILKVSYDDLEEDIKDELIDKSLRKIDNNGCVGMHDLIQDMGRKIVRQESTLEPGRRSRLWFSDDIVHVLEENKGTDSIEVIIYDLHKYKKVKWCGKAFGQMKNLKILIIRSGRFSQSPQILPNSLKVLDWSEYQSSSLPSDFNPKNLAILNLPESCLKHFVSFKSFEMLNFIDFEGCKFLTEIPSLSRVPNLGALCVDYCTNLIRIHESVGFLERLVLLSAQGCTQLECLVSFINLPSLETLDLRGCSRLERFPEVVAVMENIKDVYLDQTAIKELPFTFRKLVGLQRLFLRGCYRIIRLPSYISAKCEIITAYGCRGFRSFDDEEKVSPKVFEDAMVARNEYGWFYLDMYSCYTTSNDVIEVCMPLRDYEFGFLDMNRNLTVKKNKSSLWFWFREKLPRICLMCSVQTDKHLDNMIFIFKLKVLINGTEQFTSQCKYIFYKEKVTTQGFMCDVHCKVGGVFSGNEWNKVEILCELKTLTPCDLERVMAYQIGTTTSTATWDFKLENIGDDLSFIDNPDSPMTTEIGLNIRLFPFYRLSFLRL 961
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00322 961 Pfam NB-ARC domain 194 411 IPR002182 GO:0043531
Vifa2g00322 961 SMART AAA_5 207 345 IPR003593 GO:0016887
Vifa2g00322 961 Gene3D - 184 339 IPR027417 -
Vifa2g00322 961 ProSiteProfiles TIR domain profile. 9 177 IPR000157 GO:0007165
Vifa2g00322 961 Gene3D - 344 435 IPR042197 -
Vifa2g00322 961 SUPERFAMILY L domain-like 500 784 - -
Vifa2g00322 961 Gene3D Ribonuclease Inhibitor 487 742 IPR032675 -
Vifa2g00322 961 SMART till_3 10 150 IPR000157 GO:0007165
Vifa2g00322 961 FunFam Disease resistance protein (TIR-NBS-LRR class) 7 179 - -
Vifa2g00322 961 SUPERFAMILY "Winged helix" DNA-binding domain 415 488 IPR036390 -
Vifa2g00322 961 PRINTS Disease resistance protein signature 379 393 - -
Vifa2g00322 961 PRINTS Disease resistance protein signature 210 225 - -
Vifa2g00322 961 PRINTS Disease resistance protein signature 652 668 - -
Vifa2g00322 961 PRINTS Disease resistance protein signature 286 300 - -
Vifa2g00322 961 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 721 IPR044974 GO:0006952
Vifa2g00322 961 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 435 IPR027417 -
Vifa2g00322 961 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 152 IPR035897 -
Vifa2g00322 961 Pfam TIR domain 11 176 IPR000157 GO:0007165
Vifa2g00322 961 Gene3D - 5 183 IPR035897 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vifa2g00322 Vifa-Chr2 51312199 51315763 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00322 11 745 WRKY Transcription Factor Family AT4G12020 30.692 5.57e-82 289
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00322 - - mtr:11415136 1280.39