Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00316 ATGAGAATACATCCAGACCAAGGACAAGACATTTACATACGACTCGCATCTTCAGAGTTTGACCATAAAAAGAAAAAGAGGAACTTGAAGCGTCCTGGAACTCTTGCAGGAGTTATTGCATTCATTATAGGACTTACCGTTATTATATTGGTCACATTAACGTCTAGAAAGAAGCTTGGTAAGCCAGGAAGTATAAAAAATTTATTTCACAAGAAGGGGAAGGAAGATGGTGACTTGAAAACATTATTTGATTTTTCAACCATCGATAATGCAACAAACCACTTCTCTAGCAGAAACAAGTTAGGAGAAGGTGGTTTTGGGCCGGTGTACAAGGGCATCATGGTAGATGGCCAAGAGATTGCTGTTAAGAGGCTATCTAAAACATCAGGTCAAGGAATTAAGGAGTTCAAAAATGAAGTACAGTTGATGGCAACACTTCAACACCGCAATCTTGTAAAGCTTCTTGGTTGTTCTATTCAACAAGATGAAAAGTTATTGATCTACGAATTCATGCCCAACAGAAGCTTGGATCACTTTATTTTTGATTCTACGCAAACCAGATCATTTATGGGAGACCAAGCCGAGGCTAAAACAAATAGAGTGATGGGAACATATGGATATATGCCTCCAGAATATGCAGTGCGTGGATCTTTCTCAATAAAATCTGATGTTTTTAGTTTTGGAGTTGTTGTACTTGAGATAATTAGCGGTAAGAAGAATAGCAGATTTTGTGACTCTCGACATCATTTAAACCTTCTTGGGCATGCATGGAAACTATGGATTGAAGAAAGGCCACAGGAGTTGATAGCTGATATATTATATGATGAGGCCATATATCCTGCCAATCTCACATGTGCTATTCCTCTTCCTGGATCAGATCAAGTTCAAGTAAGGAATGGCCAAGGATACTTCTAA 915 0.3847 MRIHPDQGQDIYIRLASSEFDHKKKKRNLKRPGTLAGVIAFIIGLTVIILVTLTSRKKLGKPGSIKNLFHKKGKEDGDLKTLFDFSTIDNATNHFSSRNKLGEGGFGPVYKGIMVDGQEIAVKRLSKTSGQGIKEFKNEVQLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNRSLDHFIFDSTQTRSFMGDQAEAKTNRVMGTYGYMPPEYAVRGSFSIKSDVFSFGVVVLEIISGKKNSRFCDSRHHLNLLGHAWKLWIEERPQELIADILYDEAIYPANLTCAIPLPGSDQVQVRNGQGYF 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00316 304 ProSiteProfiles Protein kinase domain profile. 95 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa2g00316 304 SUPERFAMILY Protein kinase-like (PK-like) 82 263 IPR011009 -
Vifa2g00316 304 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 24 185 - -
Vifa2g00316 304 Pfam Protein tyrosine and serine/threonine kinase 98 183 IPR001245 GO:0004672|GO:0006468
Vifa2g00316 304 Pfam Protein tyrosine and serine/threonine kinase 186 253 IPR001245 GO:0004672|GO:0006468
Vifa2g00316 304 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 62 170 - -
Vifa2g00316 304 Gene3D Phosphorylase Kinase; domain 1 68 169 - -
Vifa2g00316 304 Gene3D Transferase(Phosphotransferase) domain 1 170 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00316 Vifa-Chr2 51158554 51168397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00316 74 269 Receptor kinase-like Gene Family AT3G45860 46.512 1.08e-64 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vifa2g00316 PK_Tyr_Ser-Thr 5.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00316 - - tpra:123915365 295.434