Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00315 ATGAGAATACATCCAGACCAAGGACAAGACATTTACATACGACTCGCATCTTCAGAGTTTGACCATAAAAAGAAAAAGAGGAACTTGAAGCGTCCTGGAACTCTTGCAGGAGTTATTGCATTCATTATAGGACTTACCGTTATTATATTGGTCACATTAACGTCTAGAAAGAAGCTTGGAAGTATAAAAAATTTATTTCACAAGAAGGGGAAGGAAGATGGTGACTTGAAAACATTATTTGATTTTTCAACCATCGATAATGCAACAAACCACTTCTCTAGCAGAAACAAGTTAGGAGAAGGTGGTTTTGGGCCGGTGTACAAGGGCATCATGGTAGATGGCCAAGAGATTGCTGTTAAGAGGCTATCTAAAACATCAGGTCAAGGAATTAAGGAGTTCAAAAATGAAGTACAGTTGATGGCAACACTTCAACACCGCAATCTTGTAAAGCTTCTTGGTTGTTCTATTCAACAAGATGAAAAGTTATTGATCTACGAATTCATGCCCAACAGAAGCTTGGATCACTTTATTTTTGATTCTACGCAAACCAGATCATTTATGGGAGACCAAGCCGAGGCTAAAACAAATAGAGTGATGGGAACATATGGATATATGCCTCCAGAATATGCAGTGCGTGGATCTTTCTCAATAAAATCTGATGTTTTTAGTTTTGGAGTTGTTGTACTTGAGATAATTAGCGGTAAGAAGAATAGCAGATTTTGTGACTCTCGACATCATTTAAACCTTCTTGGGCATGCATGGAAACTATGGATTGAAGAAAGGCCACAGGAGTTGATAGCTGATATATTATATGATGAGGCCATATATCCTGCCAATCTCACATGTGCTATTCCTCTTCCTGGATCAGATCAAGTTCAAGTAAGGAATGGCCAAGGATACTTCTAA 906 0.383 MRIHPDQGQDIYIRLASSEFDHKKKKRNLKRPGTLAGVIAFIIGLTVIILVTLTSRKKLGSIKNLFHKKGKEDGDLKTLFDFSTIDNATNHFSSRNKLGEGGFGPVYKGIMVDGQEIAVKRLSKTSGQGIKEFKNEVQLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNRSLDHFIFDSTQTRSFMGDQAEAKTNRVMGTYGYMPPEYAVRGSFSIKSDVFSFGVVVLEIISGKKNSRFCDSRHHLNLLGHAWKLWIEERPQELIADILYDEAIYPANLTCAIPLPGSDQVQVRNGQGYF 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00315 301 Pfam Protein tyrosine and serine/threonine kinase 183 250 IPR001245 GO:0004672|GO:0006468
Vifa2g00315 301 Pfam Protein tyrosine and serine/threonine kinase 95 180 IPR001245 GO:0004672|GO:0006468
Vifa2g00315 301 SUPERFAMILY Protein kinase-like (PK-like) 79 260 IPR011009 -
Vifa2g00315 301 Gene3D Transferase(Phosphotransferase) domain 1 167 284 - -
Vifa2g00315 301 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 24 182 - -
Vifa2g00315 301 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 56 167 - -
Vifa2g00315 301 Gene3D Phosphorylase Kinase; domain 1 65 166 - -
Vifa2g00315 301 ProSiteProfiles Protein kinase domain profile. 92 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00315 Vifa-Chr2 51158554 51168397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00315 71 266 Receptor kinase-like Gene Family AT3G45860 46.512 8.97e-65 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vifa2g00315 PK_Tyr_Ser-Thr 5.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00315 - - tpra:123915365 291.967