Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g00315 | ATGAGAATACATCCAGACCAAGGACAAGACATTTACATACGACTCGCATCTTCAGAGTTTGACCATAAAAAGAAAAAGAGGAACTTGAAGCGTCCTGGAACTCTTGCAGGAGTTATTGCATTCATTATAGGACTTACCGTTATTATATTGGTCACATTAACGTCTAGAAAGAAGCTTGGAAGTATAAAAAATTTATTTCACAAGAAGGGGAAGGAAGATGGTGACTTGAAAACATTATTTGATTTTTCAACCATCGATAATGCAACAAACCACTTCTCTAGCAGAAACAAGTTAGGAGAAGGTGGTTTTGGGCCGGTGTACAAGGGCATCATGGTAGATGGCCAAGAGATTGCTGTTAAGAGGCTATCTAAAACATCAGGTCAAGGAATTAAGGAGTTCAAAAATGAAGTACAGTTGATGGCAACACTTCAACACCGCAATCTTGTAAAGCTTCTTGGTTGTTCTATTCAACAAGATGAAAAGTTATTGATCTACGAATTCATGCCCAACAGAAGCTTGGATCACTTTATTTTTGATTCTACGCAAACCAGATCATTTATGGGAGACCAAGCCGAGGCTAAAACAAATAGAGTGATGGGAACATATGGATATATGCCTCCAGAATATGCAGTGCGTGGATCTTTCTCAATAAAATCTGATGTTTTTAGTTTTGGAGTTGTTGTACTTGAGATAATTAGCGGTAAGAAGAATAGCAGATTTTGTGACTCTCGACATCATTTAAACCTTCTTGGGCATGCATGGAAACTATGGATTGAAGAAAGGCCACAGGAGTTGATAGCTGATATATTATATGATGAGGCCATATATCCTGCCAATCTCACATGTGCTATTCCTCTTCCTGGATCAGATCAAGTTCAAGTAAGGAATGGCCAAGGATACTTCTAA | 906 | 0.383 | MRIHPDQGQDIYIRLASSEFDHKKKKRNLKRPGTLAGVIAFIIGLTVIILVTLTSRKKLGSIKNLFHKKGKEDGDLKTLFDFSTIDNATNHFSSRNKLGEGGFGPVYKGIMVDGQEIAVKRLSKTSGQGIKEFKNEVQLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNRSLDHFIFDSTQTRSFMGDQAEAKTNRVMGTYGYMPPEYAVRGSFSIKSDVFSFGVVVLEIISGKKNSRFCDSRHHLNLLGHAWKLWIEERPQELIADILYDEAIYPANLTCAIPLPGSDQVQVRNGQGYF | 301 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g00315 | 301 | Pfam | Protein tyrosine and serine/threonine kinase | 183 | 250 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa2g00315 | 301 | Pfam | Protein tyrosine and serine/threonine kinase | 95 | 180 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa2g00315 | 301 | SUPERFAMILY | Protein kinase-like (PK-like) | 79 | 260 | IPR011009 | - | |
Vifa2g00315 | 301 | Gene3D | Transferase(Phosphotransferase) domain 1 | 167 | 284 | - | - | |
Vifa2g00315 | 301 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 24 | 182 | - | - | |
Vifa2g00315 | 301 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 56 | 167 | - | - | |
Vifa2g00315 | 301 | Gene3D | Phosphorylase Kinase; domain 1 | 65 | 166 | - | - | |
Vifa2g00315 | 301 | ProSiteProfiles | Protein kinase domain profile. | 92 | 301 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g00315 | Vifa-Chr2 | 51158554 | 51168397 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g00315 | 71 | 266 | Receptor kinase-like Gene Family | AT3G45860 | 46.512 | 8.97e-65 | 213 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vifa2g00315 | PK_Tyr_Ser-Thr | 5.8e-08 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g00315 | - | - | tpra:123915365 | 291.967 |