Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g00313 | ATGCCCACTTTTTCTAAACAGAATACCTTTAATACTATTGCTCTAAACCAATTTATCCAGTATAGTGATACACTTGTTTCTGCAGCTGGAATTTTTGAAGCAGGATTTTTCAACTTTGGAGATCCACAACGTCAATACTTTTGTATATGGTACAAAAACTTATCACCCAGGACTATTGTGTGGGTTGCCAATAGAGACACCCCTGTACAAAACTCTACAGGGTTGCTGAAACTCAATGATCAGGGAAATCTTGTTATTCTTGATGACTCGAAAGGCGTTGTTTGGTCCTCTAATTCATCAAGAATTGTGGCGAAACCAGTTGTTGTACAATTGTTGGATTCAGGAAACCTTGTTGTGAAAGACGCAAACAGCAGCGGTGAGAATAAGGATTTCTTGTGGGAGAGTTTTGATTATCCTGGTAACACTTTCCTTGCTGGAATGAAGCTGAAAAGTAATTTAGTTACTGGTCCGTATAAATATCTCACATCTTGGAGAAGCCCTGAAGATCCTGCTGAAGGCGAGTTTACAAAAATGATAGATACACATGGTTTACCTCAATTGGTTAATTCCAAGGGAGCGAGATTTCTATATAGAGAAGGTTCGTGGAATGGATTTCTTTTCACTGGTGTTCCTTGGCAAAGACTGCGCGGAGTCTTGAATTTCTCAGTAGTGTTCAAAGACAAAGAATTCTCTTATCAATATGAAACTAGGAACATTTCAACTATTACTAGATTGGTGCTAGATCCATCTGGAAATTCACAGCGTCTTCTTTGGTCAAATAAGTCACAAATTTGGGAGGCTATAGTTAGTGATCCTGAAGACCAGTGTGATGATTATGCCTTGTGTGGTATTAACTCTAACTGCAATATTAATGACTTTCCAATATGTGAATGCTTGGAAGGTTTCACGCCAAAATTTCAATCAAAGTGGGAGTCATTAAACTGGTCCGGTGGGTGTGTAAGGAAAACACATTTAAATTGTCTCCATGGAGATGGATTTTTTATGTACACAAATATGAAGTTGCCAGATACGTCATCATCGTGGTTTGACAAGAGCCTGAGCCTTGAGGAATGCAAGATTGGCTGTTTGAAAAACTGTTCTTGCACTGCATATGCAAATTTGGATATAAGATATGGTGGTAGTGGCTGCATACTTTGGTTTGACAACATTGTGGACATGAGAATACATCCATACCAAGGACAAGACATTTACATACGACTCGCATCTTCAGAGTTTGACCATAAAAAGAAAAAGAGGAACTTGAAGCGTGCTGGAACTCTTGCAGGAGTTATTGCATTCATTATAGGACTTACCGTTATTATATTGGTCACATTAACGTCTAGAAAGAAGCTTGGTAAGCCAGGATGTATAAAAAATTTATTTCACAAGAAGGAGAAGGAAGATGGTGACTTGAAAACAATATTTGATTTTCCAACCATCGATAATGCAACAAACCACTTCTCTAGCAGAAACAAGTTAGGAGAAGGTGGTTTTGGGCCGGTGTACAAGGGCATCATGGTAGATGGCCAAGAGATTGCTGTTAAGAGGCTATCTAAAACATCAGGTCAAGGAACTGAGGAGTTCATAAATGAAGTACAGTTGATGGCAACACTTCAACACCGCAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACAAGATGAAAAGTTATTGATCTACGAATTCATGCCCAACAGAAGCTTGGATCATTTTATTTTTGATACTACGCAAAGTAAGTCAATAGATTGGACTAAGCGTTTGGAAATTATTGATGGGATTGCTCGGGAGCTGCTGTATCTCCACCAAGATTCTACACTAAGAATCATACATAAAGATCTCAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATATCAGATTTTGGTTTAGCCAGATCATTTATGGGAGATCAAGCCGAGGCTAATACAAATAGAGTGATGGGAACATATGGATATATGCCTCCAGAATATGCAGTGCGTGGATCTTTTTCAATAAAATCGGATGTTTTTAGCTTTGGAGTTGTTGTACTTGAGATAATTAGCGGTAAGAAGAATAGCAGATTTTGTGACCCTCAACATCATTTAAACCTTCTTGGGCATGCATGGAGACTATGGATTGAAGATAGGCCACTGGAGTTGATGGATGAAATATTATATGATGCTGCCATATGTTCAGAAATAATAAAATGTATTCATGTGGCTCTATTGTGTGTACAAGAGAAACCAGAAAATAGGCCTAACATGTCGTCTGTGGTTTTTATGTTAAAGGGTGGAAAGTTGCTCCCCAAACCAAGTAAACCCGGGTTCTATGCAGGAAGAGATAATACTAGCACAGAATCTTCTTCAAAGGAGGGTTCAGTAAATGAAGCTTCAATCTCATTGTTAGAGGCTAGATAG | 2406 | 0.3832 | MPTFSKQNTFNTIALNQFIQYSDTLVSAAGIFEAGFFNFGDPQRQYFCIWYKNLSPRTIVWVANRDTPVQNSTGLLKLNDQGNLVILDDSKGVVWSSNSSRIVAKPVVVQLLDSGNLVVKDANSSGENKDFLWESFDYPGNTFLAGMKLKSNLVTGPYKYLTSWRSPEDPAEGEFTKMIDTHGLPQLVNSKGARFLYREGSWNGFLFTGVPWQRLRGVLNFSVVFKDKEFSYQYETRNISTITRLVLDPSGNSQRLLWSNKSQIWEAIVSDPEDQCDDYALCGINSNCNINDFPICECLEGFTPKFQSKWESLNWSGGCVRKTHLNCLHGDGFFMYTNMKLPDTSSSWFDKSLSLEECKIGCLKNCSCTAYANLDIRYGGSGCILWFDNIVDMRIHPYQGQDIYIRLASSEFDHKKKKRNLKRAGTLAGVIAFIIGLTVIILVTLTSRKKLGKPGCIKNLFHKKEKEDGDLKTIFDFPTIDNATNHFSSRNKLGEGGFGPVYKGIMVDGQEIAVKRLSKTSGQGTEEFINEVQLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNRSLDHFIFDTTQSKSIDWTKRLEIIDGIARELLYLHQDSTLRIIHKDLKTSNILLDIDMIPKISDFGLARSFMGDQAEANTNRVMGTYGYMPPEYAVRGSFSIKSDVFSFGVVVLEIISGKKNSRFCDPQHHLNLLGHAWRLWIEDRPLELMDEILYDAAICSEIIKCIHVALLCVQEKPENRPNMSSVVFMLKGGKLLPKPSKPGFYAGRDNTSTESSSKEGSVNEASISLLEAR | 801 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g00313 | 801 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 6 | 136 | - | - | |
Vifa2g00313 | 801 | Pfam | PAN-like domain | 327 | 393 | IPR003609 | - | |
Vifa2g00313 | 801 | CDD | B_lectin | 24 | 139 | IPR001480 | - | |
Vifa2g00313 | 801 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 326 | 407 | - | - | |
Vifa2g00313 | 801 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 563 | 765 | - | - | |
Vifa2g00313 | 801 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 608 | 620 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa2g00313 | 801 | SMART | serkin_6 | 487 | 738 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa2g00313 | 801 | SMART | ntp_6 | 328 | 407 | IPR003609 | - | |
Vifa2g00313 | 801 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 59 | 170 | IPR036426 | - | |
Vifa2g00313 | 801 | Gene3D | Transferase(Phosphotransferase) domain 1 | 563 | 764 | - | - | |
Vifa2g00313 | 801 | PIRSF | SRK | 1 | 801 | IPR024171 | GO:0004674 | |
Vifa2g00313 | 801 | ProSiteProfiles | PAN/Apple domain profile. | 327 | 408 | IPR003609 | - | |
Vifa2g00313 | 801 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 11 | 749 | - | - | |
Vifa2g00313 | 801 | Pfam | Protein tyrosine and serine/threonine kinase | 490 | 755 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa2g00313 | 801 | Gene3D | Hepatocyte Growth Factor | 324 | 405 | - | - | |
Vifa2g00313 | 801 | CDD | STKc_IRAK | 493 | 760 | - | - | |
Vifa2g00313 | 801 | Pfam | S-locus glycoprotein domain | 197 | 306 | IPR000858 | GO:0048544 | |
Vifa2g00313 | 801 | MobiDBLite | consensus disorder prediction | 774 | 792 | - | - | |
Vifa2g00313 | 801 | ProSiteProfiles | Bulb-type lectin domain profile. | 10 | 132 | IPR001480 | - | |
Vifa2g00313 | 801 | SMART | blect_4 | 16 | 139 | IPR001480 | - | |
Vifa2g00313 | 801 | ProSiteProfiles | Protein kinase domain profile. | 487 | 764 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa2g00313 | 801 | Gene3D | Phosphorylase Kinase; domain 1 | 460 | 562 | - | - | |
Vifa2g00313 | 801 | Pfam | D-mannose binding lectin | 58 | 165 | IPR001480 | - | |
Vifa2g00313 | 801 | Gene3D | - | 5 | 136 | IPR036426 | - | |
Vifa2g00313 | 801 | CDD | PAN_AP_plant | 323 | 408 | - | - | |
Vifa2g00313 | 801 | MobiDBLite | consensus disorder prediction | 765 | 801 | - | - | |
Vifa2g00313 | 801 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 456 | 562 | - | - | |
Vifa2g00313 | 801 | SUPERFAMILY | Protein kinase-like (PK-like) | 473 | 758 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g00313 | Vifa-Chr2 | 51150263 | 51153448 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g00313 | 475 | 801 | Receptor kinase-like Gene Family | AT4G11530 | 55.786 | 6.65e-119 | 372 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vifa2g00313 | PK_Tyr_Ser-Thr | 2.2e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g00313 | - | - | tpra:123915365 | 1270.37 |