Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa2g00255 | ATGAAAATCCCTTGTTGTTCGGTGTGCCAAACGCGGTACAACGAAGAAGAACGAGTTCCGCTTCTTCTTCAATGTGGCCATGGCTTCTGCAAAGAGTGTCTTTCTAGAATGTTCTCAGCTTCTTCCGACGCGACTCTCACTTGTCCTCGGTGTCGCCACGTGTCCACCGTCGGTAACTCCGTTCAAGCTTTACGCAAAAACTACGCGGTGCTTTCGTTAATCCACTCCGCCGCGGAAGCTGCTGCCGCCGCTGCCGGAGGTGGTGGTAGAGGTTCGAATTTTGAATGTGATTATACTGATGATGAGGAAGACGGTGACGGTGATGTTGACGACGGTGACGACGAGAAGCGGCGTCGGAACAGCCGTGGCTCGCAGACGTCGAGTTCTGGAGGTTGTGCTCCGGTGATTGAGGTCGGTGTACATCAGGATTTGAAGCTTGTGAGGCGGATTGGGGAAGGGAGGAGAGCTGGTGTGGAGATGTGGACGGCGGTGATCGGAGGTGGACGGTGTCGGCATCATGTGGCGGTGAAGAAGGCGGTTATAATGGAGGGGGTGGATTTGGATTGGATGTTAGGGAAGCTGGAGGATTTGCGTAGGGCTTCGATGTGGTGTAGGAATGTGTGTACTTTTCATGGAGCGATGAAGGTTGAAGAGAGTTTGTGTCTTGTGGTGGATAAATGTTATGGATCGGTTCAATCTGAGATGCAGCGGAATGAAGGAAGACTCACTTTGGAGCAAGTTTTAAGATACGGGGCAGACATTGCACGGGGGGTTGTTGAGCTTCACGCTGCAGGCGTTGTTTGCATGAACTTAAAGCCTTCCAATCTGCTTCTTGATGCAAATGGTCATGCTGTGGTTTCTGATTACGGACTTGCTACAATTCTGAAGAAGCCTTCCTGTTGGAAGGCTCGACCTGAGTGTGACTCCACAAAGATCCATTCCTGTATGGAATGTATAATGCTTAGCCCACATTATACAGCACCTGAGGCTTGGGAGCCTGTGAAGAAGTCATTACATTTGTTTTGGGATGATGGAATAGGTATATCTCCCGAATCAGATGCCTGGAGTTTTGGTTGTACATTGGTGGAGATGTGCACCGGTGCCATTCCTTGGGCTGGCTTGAGTGCAGAGGAAATCTACCGGGCAGTTGTAAAGGCAAAGAAACAACCTCCACAATATGCTAGTGTGGTTGGTGGTGGAATTCCAAGGGAGTTGTGGAAGATGATTGGAGAGTGTTTACAATTCAAACCATCTAAAAGACCTACTTTTAATGCAATGCTGGCAATATTTCTCCGACATTTGCAAGAAATACCTCGTAGCCCTCCTGCAAGCCCTGATAATGACCTTCTTAAGGGCTCTGTATCAAATGTGGCAGAGCCTTCCCCAATACCTGAATTAGAAGTTCCTCAGGACCCAAACCGTCTTCATCAACTTGTGTCTGAAGGGGATGTCACCGGTGTTAGAGACTTCTTGGCAAAGGCTGCATCAGAAAATGAAAGTAACTACATATCTTCACTGCTGGAAGCTCAAAATGCTGATGGACAAACGGCTCTCCATTTGGCCTGTAGACGTGGCAGTGCAGAGCTTGTTGAGACAATTCTGGAGTATCAAGAGGCTAATGTTGATGTCTTGGACAAAGATGGGGATCCTCCTCTTGTTTTTGCCTTAGCAGCTGGATCCCATGAATGTGTTCGTAGCCTTATCAAAAGAAATGCTTGTGTGAGGTCACGGTTGAGAGATGGGCTTGGCCCATCAGTAGCTCATGTCTGTGCCTATCATGGTCAGCCAGATTGTATGCGAGAGTTACTTTTAGCTGGAGCTGATCCCAATGCAGTAGATGATGAAGGTGAATCTGTACTGCACAGGGCAATTGCCAAGAAGTTCACAGACTGTGCTATCGTGATAGTGGAAAATGGAGGCTGTAGATCGATGGCCATCTTGAATTCAAAAAATCTGACGCCGCTGCACTTGTGTGTAGCAACATGGAATGTTTCTGTTGTGAAGAGATGGGTGGAAGTTGCAACTTCTGATGAGATTGCTGAAGCAATTGACATGTCAAGCCCTCTTGGCACTGCCTTGTGCATGGCAGCTGCTTCTAAGAAAGACCATGAAAGTGAGGGGAGAGACTTGGTGCGGATATTGCTTACAGCAGGAGCTGATCCATCTGCTCAAGATTCACAGAATGGGAGGACAGCTTTGCATACAGCTGCTATGACAAATGATGTGGACTTGGTTCAGGTTATTCTTGCTGCTGGTGTTGATGTGAACATTCGCAATGTGCACAACAGTATACCTCTTCACTTGGCCTTAGCTAGGGGTGCAAAGGCATGTGTCGGACTGCTTCTAGCTGCTGGGGCAGATTATAACTTGCAGGATGATGATGGTGATAATGCTTTCCATATAGCAGCAGAAACAGCAAAAATGATACGGGAAAATCTGGACTGGCTTATTGTTATGTTAAAGAATCCCGATGCCGATATTGAAGTCAGAAACCACAGTGGCAAGACATTACGGGACATTTTAGAGGCTCTACCCCGAGAATGGATATCTGAAGATCTGATGGAAGCACTCACAAATAGAGGAGTTCATTTATCTCCTACAATATTTGAAGTGGGAGATTGGGTGAAGTTTAAAAGAACTGTCACAACTCCAACATATGGGTGGCAAGATGCTAGACCAAAGAGTGTTGGCTTTGTGCAAAGTGTTCCAGACAGGGATAATCTCGTTGTTTCATTTTGTTCGGGAGATGTTCATGTTCTGCCAAATGAAGTTGTAAAAGTTGTTCCATTGGACAGGGGACAACATGTACAACTGAAAGAAGATGTAAAAGAGCCTAGGTTTGGTTGGCGTGGGCAGTCACGTGACAGCATTGGGACCGTATTATGTGTTGACGAGGATGGAATCCTCCGTGTTGGGTTTCCTGGAGCATCCAGAGGATGGAAAGCTGACCCAGCAGAGATGGAACGTGTTGAGGAGTTCAAGGTTGGAGATTGGGTTCGTATTCGTCCAACTCTTACATCTGCAAAGCATGGATTAGGATCTGTGACACCAGGAAGCATTGGTATTGTATATTGTATCCGACCTGACAGTAGTCTGTTAATTGAACTGAGCTATCTTCCAAATCCATGGCATTGTGAACCAGAAGAGGTTGAGCATGTTCCTCCTTTTACGATTGGTGATAGGGTCTGTGTGAAGCGTTCTGTCGCAGAACCTAGATATGCTTGGGGTGGTGAGACACATCATAGTGTTGGAAGAATAAGTGAGATTGAGAATGATGGTCTCTTAATAATAGACATACCAAATCGTCCCATACCATGGCAAGCTGATGCATCTGATATGGAGAAAGTGGAAGATTTTAAGGTTGGAGATTGGGTTCGAGTGAAAGCTTCGGTATCTTCTCCAAAATATGGATGGGAGGATATTACAAGGAACAGTATTGGGGTGGGACAAGAAATTCATGTGATGCAATCTGTTACTCAGCCACGGCTTGGGTGGTCTAATGAATCACCAGCTACTGTTGGAAAAATAGTGAGAATTGACATGGATGGTGCTCTCAATGCGAGGGTCACTGGTAGGCAGAGCTTGTGGAAAGTATCTCCTGGAGATGCCGAGCGACTTCCAGGATTTGAGGTTGGGGATTGGGTACGCTCTAAACCAAGCCTGGGAACTAGACCTAGTTATGACTGGAATAGTGTTGGGAGAGAGAGTTTAGCTGTTGTGCATAGTGTACAGGATTCTGGTTATTTGGAGTTGGCTTGCTGTTTCCGTAAAGGGAAGTGGATCACTCATTATACAGATGTTGAAAAGGTTCCTAGCTTTAAAGTTGGGCAGTATGTTAGGTTCCGACTTGGTTTGGTTGAACCTAGGTGGGGTTGGAGAGGAGCTCAGCCTGAATCTCAAGGTATTATAACCAGTATTCATGCAGATGGAGAAGTCAGGGTTGCATTCTTTGGTTTGCCAGGACTGTGGAAAGGTGATCCTTCAGATCTGCAGGCAGAGCAAATCTTTGAAGTGGGAGAGTGGGTGAGATTGAAAGAAAATGCAAATGATTGGAAATCAATTGGGCCAGGTAGTGTTGGCGTTGTTCAAGGAATAGGGTATGAAGGAGATGAAATTGATAGAAGCACTTTTGTTGGCTTTTGTGGGGAGCAGGAAAAATGGGTAGGACCAAGTTCTCATCTTGAAAGAGTTGACAAACTATTTGTGGGACAGAAAATTAAAGTGAAACAATATGTAAAACAACCTAGATTTGGGTGGTCGGGGCACACCCATGCTAGTATTGGTACTATACAAGCAATTGATGCTGATGGAAAGCTTCGAATATACACTCCAGCAGGTTCAAAAACATGGATGTTGGACCCATCAGAAGTTGAGGTGGTAGAAGAGAAGGAGCTTTGTATTGGAGACTGGGTAAAGGTTAGAGCATCAGTTTCAACTCCAACCCACCATTGGGGGGAAGTGAGTCATTCAAGTGTTGGAGTTGTGCATCGGATGGAAGACGATAACCTATGGGTGTCATTCTGTTTTGTGGAGCGGTTATGGCTTTGTAAGGCAAGTGAAATGGAACGGGTTAGGCCGTACAAAGTGGGAGACAAAGTAAAGATCAGAGATGGACTGGTATCGCCGCGGTGGGGATGGGGAATGGAAACCCACGCCAGCAGGGGACAAGTTGTAGGAGTAGATGCAAATGGTAAACTAAGAATAAGGTTCCGATGGAGGGAAGGGAGGCCTTGGATAGGAGATCCTGCTGATATTGCCCTTGATGAAAACTGA | 4773 | 0.4634 | MKIPCCSVCQTRYNEEERVPLLLQCGHGFCKECLSRMFSASSDATLTCPRCRHVSTVGNSVQALRKNYAVLSLIHSAAEAAAAAAGGGGRGSNFECDYTDDEEDGDGDVDDGDDEKRRRNSRGSQTSSSGGCAPVIEVGVHQDLKLVRRIGEGRRAGVEMWTAVIGGGRCRHHVAVKKAVIMEGVDLDWMLGKLEDLRRASMWCRNVCTFHGAMKVEESLCLVVDKCYGSVQSEMQRNEGRLTLEQVLRYGADIARGVVELHAAGVVCMNLKPSNLLLDANGHAVVSDYGLATILKKPSCWKARPECDSTKIHSCMECIMLSPHYTAPEAWEPVKKSLHLFWDDGIGISPESDAWSFGCTLVEMCTGAIPWAGLSAEEIYRAVVKAKKQPPQYASVVGGGIPRELWKMIGECLQFKPSKRPTFNAMLAIFLRHLQEIPRSPPASPDNDLLKGSVSNVAEPSPIPELEVPQDPNRLHQLVSEGDVTGVRDFLAKAASENESNYISSLLEAQNADGQTALHLACRRGSAELVETILEYQEANVDVLDKDGDPPLVFALAAGSHECVRSLIKRNACVRSRLRDGLGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGESVLHRAIAKKFTDCAIVIVENGGCRSMAILNSKNLTPLHLCVATWNVSVVKRWVEVATSDEIAEAIDMSSPLGTALCMAAASKKDHESEGRDLVRILLTAGADPSAQDSQNGRTALHTAAMTNDVDLVQVILAAGVDVNIRNVHNSIPLHLALARGAKACVGLLLAAGADYNLQDDDGDNAFHIAAETAKMIRENLDWLIVMLKNPDADIEVRNHSGKTLRDILEALPREWISEDLMEALTNRGVHLSPTIFEVGDWVKFKRTVTTPTYGWQDARPKSVGFVQSVPDRDNLVVSFCSGDVHVLPNEVVKVVPLDRGQHVQLKEDVKEPRFGWRGQSRDSIGTVLCVDEDGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPNPWHCEPEEVEHVPPFTIGDRVCVKRSVAEPRYAWGGETHHSVGRISEIENDGLLIIDIPNRPIPWQADASDMEKVEDFKVGDWVRVKASVSSPKYGWEDITRNSIGVGQEIHVMQSVTQPRLGWSNESPATVGKIVRIDMDGALNARVTGRQSLWKVSPGDAERLPGFEVGDWVRSKPSLGTRPSYDWNSVGRESLAVVHSVQDSGYLELACCFRKGKWITHYTDVEKVPSFKVGQYVRFRLGLVEPRWGWRGAQPESQGIITSIHADGEVRVAFFGLPGLWKGDPSDLQAEQIFEVGEWVRLKENANDWKSIGPGSVGVVQGIGYEGDEIDRSTFVGFCGEQEKWVGPSSHLERVDKLFVGQKIKVKQYVKQPRFGWSGHTHASIGTIQAIDADGKLRIYTPAGSKTWMLDPSEVEVVEEKELCIGDWVKVRASVSTPTHHWGEVSHSSVGVVHRMEDDNLWVSFCFVERLWLCKASEMERVRPYKVGDKVKIRDGLVSPRWGWGMETHASRGQVVGVDANGKLRIRFRWREGRPWIGDPADIALDEN | 1590 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa2g00255 | 1590 | MobiDBLite | consensus disorder prediction | 440 | 469 | - | - | |
| Vifa2g00255 | 1590 | Pfam | RING-type zinc-finger | 6 | 49 | IPR027370 | - | |
| Vifa2g00255 | 1590 | ProSiteProfiles | Ankyrin repeat profile. | 728 | 760 | IPR002110 | GO:0005515 | |
| Vifa2g00255 | 1590 | ProSitePatterns | Zinc finger RING-type signature. | 25 | 34 | IPR017907 | - | |
| Vifa2g00255 | 1590 | FunFam | E3 ubiquitin-protein ligase KEG | 727 | 860 | - | - | |
| Vifa2g00255 | 1590 | ProSiteProfiles | Ankyrin repeat profile. | 582 | 614 | IPR002110 | GO:0005515 | |
| Vifa2g00255 | 1590 | SMART | ANK_2a | 547 | 576 | IPR002110 | GO:0005515 | |
| Vifa2g00255 | 1590 | SMART | ANK_2a | 650 | 681 | IPR002110 | GO:0005515 | |
| Vifa2g00255 | 1590 | SMART | ANK_2a | 728 | 757 | IPR002110 | GO:0005515 | |
| Vifa2g00255 | 1590 | SMART | ANK_2a | 688 | 723 | IPR002110 | GO:0005515 |
Showing 1 to 10 of 49 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa2g00255 | K16279 | - | gmx:100777576 | 2905.93 |
Showing 1 to 1 of 1 entries